Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0928 ATGTTTTCGTGGCTGGCAAGGATGGTTTCTACATGTTTGAGACCAATAAGGCGGTATGCCCGTATGAACAGGGATGATTTCGATGATTCTTCCGCGTCTGAAGACGCTCTCCTCTGGTACAAGGAACTTGAGAAGCACTCGTGCGGCGAATTCTCTTTTGCTGTGGTTCAGGCTAATGAAGTAATTGAGGATCAAAGCCAGGTTGTGACGGGGCCAGACGCCGTGTTCGTTGGGATATACGATGGCCATGGCGGTCCCGAAGCGTCCCGGTTCGTCTGCGATCACCTCTTCCATCATCTAATGAGGATTGCTCAAGAAAATGGTACCATATCGGAAGATATTATCAGGGATGCTGTTTCTGCTACTGAAGATGGATTTCTGAATCTTGTTCGAAGATCATTTGGTATAAAGCCATTGATAGCAGCAGCGGGTTCCTGTTGTCTGGTGGGTGTTATTTGGAAAGGGACATTATATGTTGCAAATCTTGGAGATTCTCGTGCTGTAATTGGCTATTTGCGCGGGTCTAATAAGATCGTTGCTGAGCAGTTGACCAAAGAGCACAATGCTAGCAGAGAGGAGGTAAGACGAGAACTGAGGACTTTGCATCCAGAAGACTCACAAATTGTAGTTATGAAGCACGGAACATGGCGTATTAAAGGCATCATTCAGGTATCCAGAGCTATAGGTGATGCATATTTGAAGAGACCAGAGTTCGCTCTTGATTCTTCCTACCCACGGTTCCATCTGCCAGATCCTATCCGTCAACCTGTGCTTTCAGCAGAACCATCTATATGTTCCAGAGTTATACAGCCAAATGATAAATTTCTTATATTTGCATCTGATGGCCTTTGGGAACACATGACAAACCAGGAAGCTGCTGAGATTGTTTATAACAACCCACGAACTGGTATTGCAAGAAGACTTGCGAGAGTTGCCCTGAATGAGGCGGCTAGGAAGAGGGAAATGAGATGTAAAGACATGCAGAAAGTTGAGAAGGGGATCAGGAGGTTTTTTCATGATGACATCTCTGTTGTTGTGATCTTCATAGACCATGAGTGGCATGGAAAGAAGATACCCATACCAGAGTTATCCATTAGAGGTTTCGTCGACAAGGTTGGACCATCAAATCTTAAAATTGTCTGGAAGGGGCAAAACTTATTGGGAAATGGCCTTATTACAAGGTTCACTCTTAGGCTTATCGCCTACCAATTTGAATCGGATGTCCCTGCTTGGTTAAAGTTGCCATTAAGGGGAAGCTCTAACAATTCTATGTTAAGTCAAAGTTGA 1287 0.4452 MFSWLARMVSTCLRPIRRYARMNRDDFDDSSASEDALLWYKELEKHSCGEFSFAVVQANEVIEDQSQVVTGPDAVFVGIYDGHGGPEASRFVCDHLFHHLMRIAQENGTISEDIIRDAVSATEDGFLNLVRRSFGIKPLIAAAGSCCLVGVIWKGTLYVANLGDSRAVIGYLRGSNKIVAEQLTKEHNASREEVRRELRTLHPEDSQIVVMKHGTWRIKGIIQVSRAIGDAYLKRPEFALDSSYPRFHLPDPIRQPVLSAEPSICSRVIQPNDKFLIFASDGLWEHMTNQEAAEIVYNNPRTGIARRLARVALNEAARKREMRCKDMQKVEKGIRRFFHDDISVVVIFIDHEWHGKKIPIPELSIRGFVDKVGPSNLKIVWKGQNLLGNGLITRFTLRLIAYQFESDVPAWLKLPLRGSSNNSMLSQS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0928 428 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
Lele05g0928 428 Coils Coil 180 200 - -
Lele05g0928 428 Gene3D - 28 357 IPR036457 -
Lele05g0928 428 ProSiteProfiles PPM-type phosphatase domain profile. 50 349 IPR001932 -
Lele05g0928 428 CDD PP2Cc 51 349 IPR001932 -
Lele05g0928 428 SUPERFAMILY PP2C-like 55 350 IPR036457 -
Lele05g0928 428 SMART PP2C_4 44 347 IPR001932 -
Lele05g0928 428 FunFam Probable protein phosphatase 2C 42 41 357 - -
Lele05g0928 428 PANTHER PROTEIN PHOSPHATASE 36 347 - -
Lele05g0928 428 Pfam Protein phosphatase 2C 73 318 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0928 Lele-ChrLele05 5716219 5719414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0928 1 379 PP2C-type Phosphatase Gene Family AT5G06750 67.436 0.0 526