Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0923 ATGTATGTTATCTTCCTGCGTATTCCTCTTTGTAAAACAACTTTGGTTATTGATAATGATCATCTTCCCCCAGATCCAAACAGAACCCTGAGAGCTAGCTGTATTCCTGGTGATGCAATATCTGCTGTAGATTCTGTCCCACATTTCAGAATGTACATTGACATGGAGGCTCAAATTCACCAACTTGAGCAAGAAGCATACTCATCTGTCTTGCGTGCTTTCAAAGCTCAGTCTGATGCTCTTACTTGGGAGAAGGAAGGCTTGATAACTGAGCTCAGGAAAGAGCTAAGGGTTTCAGATGATGAACACAGAGAGCTTCTTACAAGGGTAAATGCTGATGAAATTATCCACCGGATACGGGAGTGGAGGCAAACTGGTACTTACCAACCGTCAATGCGCAGCAGTTCTCAACCTGTTCAGGATGTTTTACCGAGTCCAACTGTTTCTGCTTCTCGTAAGAAACAGAAGACATCCCAATCGGTCCAGTCATTACCTGGTTTGTCTTCAGTGAAGTCTGTGCAGTATCCTGCTGGAGCTGCTGGAGGTAGGCATTTGCCAAGTCGCAGTTCTTTTAATGCCCGCTCATCTAATGCACCTGCTGAAGCAGCAGCTTCTGATCCATTGATAGGGAAGAAAGTTTGGACTAAATGGCCTGAAGACAACCATTTTTACGAGGCTGTCATAAGTGATTGCAACCCTACAGAGGGACGTTATGCATTGGTATATGACATTAACACATCAAGTGAAACCTGGGAATGGGTTGATCTCAAGGAGATATCACCTGAGGACATACGTTGGGATGGAGATCCAGGCATACCCCACAGAGGTGGGCCTGGTGGGCAAGGCCATGGGATTAAGAAATCTTTTAGCCGCGGTGTTGATATTCTAGGTACTGGAAGAGGGAAAGGAAATCCAAAGGTTCAGCCTACAAAAGAATTTCACCTACCGCAAAATGGTATTGTGAAAAGAGTATTGGATGAATTCGAGTTGCTGAATACAGATTTACTGGTTAAAGAGGAGCATGAGCAGGCACTTGTTGATGCTATCGCGAGACTTGCAGATGCATCTGATGGTGAAGGTGCCAACTCGTCAGTGAAATATGAAGAGGGCACTAGAAAGGTTGGTTCTGAAGCTCCCGTTACCCCCTCCTCTGTCTCTCACAGCAACGAAGAACGTAGAGATCTTCGTTCTCGCTACCAGTCCGCGACGAATCTTATTTATGATGAAAGCGAAGGCATAACAAGACCTAACTCTGAGAAGTTTGATTTGATCTTTAGAGGTGTGGAGAGCTTACATGAACGAGTTAGAAGACCCAGAGAACAAGTGGCTGATGCAAAAGCTCTTCTGGACATCACGGAGTGCTTGGTATCGTCTGTGAAGGCTCACACCAATGATGGATTAACTCCTTCAGGCTTTATCTCTCATCTCCTTAACGAATTTGGAGAACACTGTAAATCAAAGACAAGGGCTCAGGACTGCAGGAACTCAATACTTTGGAAGGATCTTGGGGTTGCGGTATCAGATATTCATTTTCGATTTTTCTTCTTCTTCAGGATTGGCCCCATGGACACTGAAATTGATCGGCCAGAAGAGGTAAAACTTGATGGTTGTTCGAGCGAAAGGATAGTTGATACAGATGAAAACATGTCAACCATGTTTAATATCTTGAGGGAAAAAAGAGTTGTCAGGCTGGAAAATTTGGTATTGAACAGGAACTCTTTTGCCCAGACGGTGGAGAATTTATTTGCTCTTTCATTTTTAGTCAAAGATGGAAGAGCCGAAATAAAAGTGAATGAGAATGGATCGCAACTGGTTTACGCAATTCTTTCTGGTGAAGTTGCTCACAGCCACTTTGTCTTCAGATTTGACTTTAAAGATTGGGAGCCTCCGCATCCTAGAGCAGCTTGGCGCCCTGCTCTTTCGAAACCCTCTTCTAGGGCTAGGCTTTCCCGCCTTAATCCCTCTCTACTTCTACTATCCTCTTGA 1986 0.4441 MYVIFLRIPLCKTTLVIDNDHLPPDPNRTLRASCIPGDAISAVDSVPHFRMYIDMEAQIHQLEQEAYSSVLRAFKAQSDALTWEKEGLITELRKELRVSDDEHRELLTRVNADEIIHRIREWRQTGTYQPSMRSSSQPVQDVLPSPTVSASRKKQKTSQSVQSLPGLSSVKSVQYPAGAAGGRHLPSRSSFNARSSNAPAEAAASDPLIGKKVWTKWPEDNHFYEAVISDCNPTEGRYALVYDINTSSETWEWVDLKEISPEDIRWDGDPGIPHRGGPGGQGHGIKKSFSRGVDILGTGRGKGNPKVQPTKEFHLPQNGIVKRVLDEFELLNTDLLVKEEHEQALVDAIARLADASDGEGANSSVKYEEGTRKVGSEAPVTPSSVSHSNEERRDLRSRYQSATNLIYDESEGITRPNSEKFDLIFRGVESLHERVRRPREQVADAKALLDITECLVSSVKAHTNDGLTPSGFISHLLNEFGEHCKSKTRAQDCRNSILWKDLGVAVSDIHFRFFFFFRIGPMDTEIDRPEEVKLDGCSSERIVDTDENMSTMFNILREKRVVRLENLVLNRNSFAQTVENLFALSFLVKDGRAEIKVNENGSQLVYAILSGEVAHSHFVFRFDFKDWEPPHPRAAWRPALSKPSSRARLSRLNPSLLLLSS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0923 661 SMART agenet_At_2 205 264 IPR014002 -
Lele05g0923 661 MobiDBLite consensus disorder prediction 178 205 - -
Lele05g0923 661 PANTHER PROTEIN EMSY-LIKE 4 22 359 IPR033485 GO:0050832
Lele05g0923 661 MobiDBLite consensus disorder prediction 126 165 - -
Lele05g0923 661 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 55 142 IPR005491 -
Lele05g0923 661 Gene3D - 206 261 - -
Lele05g0923 661 Gene3D ENT domain 52 171 IPR036142 -
Lele05g0923 661 Pfam ENT domain 57 124 IPR005491 -
Lele05g0923 661 SMART ENT_2 55 128 IPR005491 -
Lele05g0923 661 SUPERFAMILY Tudor/PWWP/MBT 207 246 - -
Lele05g0923 661 SUPERFAMILY ENT-like 50 164 IPR036142 -
Lele05g0923 661 MobiDBLite consensus disorder prediction 357 396 - -
Lele05g0923 661 FunFam Protein EMSY-LIKE 4 51 180 - -
Lele05g0923 661 Pfam Nse4 C-terminal 562 628 IPR014854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0923 Lele-ChrLele05 5677318 5685912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0923 391 628 Non-SMC Element family AT1G51130 46.591 5.76e-66 221