Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0915 ATGGCATTCTTTCCAGGAAACAAACGAGTATACTTCACAAAGACGCGGATTATCGAGGAAATGGTTTACAAGTGCCACTATATGCATCTCATTATCATTGCCGTCTCGGCAATTTTGAGTTCCCTGGGTACCGCGTCAACTGATCCGGCTGACGTCACAGCTCTCCGAGATCTATACAAGACATTGAACCGACCGCCGGTGTTGAAGAAATGGAATCTTGAAGATCCTTGTGAGGAATCTTGGTTAGGAGTAGCGTGTTCTGGGTCGTCAGTCATACACCTCAAAATTCAAGGATTGAATCTCACAGGACATCTTGGAAGTCAGCTCCATAATCTACATAATTTGAAGATGCTTGATGTCAGCTCCAATAACATAGCAGGGAAAATACCATTCAACTTACCCCCGAATGCTACACATATAAATATGGCTTGCAACTATTTGGATCAAAATATTCCTCACACATTACCTATGCTGAAAAGACTTCGACATTTGAATCTGAGCCACAATTTGTTATCTGGACCCATAGGCAACTTTTTTACAGGCCTAGATATTCTCAAAGAGATGGACCTTTCATATAACAATTTCACAGGAGATCTACCCAGTTCCTTTGGTTGCTTGAAAAACCTTACCGGATTGTTCTTGCAAAATAATAACTTCACTGGATCAGTCGCATATCTGACTGACCTCCCACTTACTGATTTGAACATTCAAGGTAATCTATTTAGCGGCGTTATTCCGCAGCATTTTCAGTCCATACCAAATTTATGGATCGGAAGTAATAAATTCCATGCAGCAGCCAATTCTCCTCCCTGGGATTTTCCTTTGGGTAGAGCACCAGTTGTATACAACGTTAGTCGACCGCCCACGACTCAGGCAAATGCCATCGAGAACCATTCTTCTCGCAAAGTAAGTGAGCACAAGAAGAAACTTATGAGTGCTGGAGAAGTAGCTTTTATGGTTGGTGGGGGAACGCTAATAGTTACAGTTGTAGCGCTCTTCATTGCAATCCGTTTGAATCGATTGAGTGAAAAGAGGCTCAAAATCTTAGAAAGCAGCCATATCTCATTGCAATCTCATCCAATCATTTCAACCATAGATAGCCCACCTACCGCACCAGAAGAAAGCCCACGAATCCCGCCATTTAATTCTGTATCTCTTTTGGGTCCAAGGCGATTGCCTCCACTGCCCCATAACAGAACAGGGGAAATGTCAAGAAGAAGTTTTTCCAGAAGACGCAGATTCTCAAGAAGGACAAAAGTATACTCAGTGGGAGAGCTTCAGTTAGCTTCAGACAGCTTTAGTGAAGACAATTTTCTGGGAGAGGGATCTTTGGGTCCTGTTTACAGAGCTGTGTTTCCATATGGCCAAACTCTGGCTGTGAAGAATATCAACATGGCGGGCCTGTCTTTCCACGACGAGGAAGAAACGTTTTTGGATGTCGTTTCCACTGGTTCCCGTCTGAGGCACCCCAACATCGTTGCGCTTAATGGTTATTGTATGGAGCACGGGCAGCATCTTCTTGTTTACGATTATGTTAGAAACTTAACTCTGGAAGATGCTCTTCACAGTGACGCATACGAGCCTTTGTCTTGGGCCCTCCGTCTCCGCATTGCCCTTGGTGTTGCTCAGGCTCTGAATTATTTGCACTCGGCGTTCTCCCCTCCTGTAGCGCACGGCAACTTGAAGGCTGCCAATATCCTTATCGACGAAAATCTGATGCCGCGTGTCTGTGACTGTGGCCTTGATGTTTTGAGACCGCTAGTGAGCAACAACGTCAGAGCTTATGAACTTGCAACTCAAGACGCAGGCTACATTGCACCAGACCACGGCGAACCAGGAATTAGCAAAACGAAGAGTGACGTCTATGCCTTTGGGGTGTTGCTTCTGGAATTATTAACGGCAAGGAAACCTTATGATGATTCGAGGCCAAGGGAGGAACAATACCTGGGACAATGGGCATCATCGAGGATACATGAGAATGAGAGTTTGGAACAGATGATGGATCCAGGAATTCAAGGGACAGTTACAACCAAAGCTCTTTCTCGGTATGCCGATATCGTCTCCCTCTGCATACAGCCCGTGAAAGAATTCCGCCCTCCAATGTCGGAGGTGGTTGACTCTCTTATAATCTGTTCACAAAAGCAGAACACGGCCATATCCAAGAGTGGAGATATTACTGACTTGGATTCACTTAACAAGTCTTTCCGTTCAACCAATAGTCGCTTTCTGGGTTCCCCCGCTTATAGCTACGTTTCTGCCTGA 2262 0.4505 MAFFPGNKRVYFTKTRIIEEMVYKCHYMHLIIIAVSAILSSLGTASTDPADVTALRDLYKTLNRPPVLKKWNLEDPCEESWLGVACSGSSVIHLKIQGLNLTGHLGSQLHNLHNLKMLDVSSNNIAGKIPFNLPPNATHINMACNYLDQNIPHTLPMLKRLRHLNLSHNLLSGPIGNFFTGLDILKEMDLSYNNFTGDLPSSFGCLKNLTGLFLQNNNFTGSVAYLTDLPLTDLNIQGNLFSGVIPQHFQSIPNLWIGSNKFHAAANSPPWDFPLGRAPVVYNVSRPPTTQANAIENHSSRKVSEHKKKLMSAGEVAFMVGGGTLIVTVVALFIAIRLNRLSEKRLKILESSHISLQSHPIISTIDSPPTAPEESPRIPPFNSVSLLGPRRLPPLPHNRTGEMSRRSFSRRRRFSRRTKVYSVGELQLASDSFSEDNFLGEGSLGPVYRAVFPYGQTLAVKNINMAGLSFHDEEETFLDVVSTGSRLRHPNIVALNGYCMEHGQHLLVYDYVRNLTLEDALHSDAYEPLSWALRLRIALGVAQALNYLHSAFSPPVAHGNLKAANILIDENLMPRVCDCGLDVLRPLVSNNVRAYELATQDAGYIAPDHGEPGISKTKSDVYAFGVLLLELLTARKPYDDSRPREEQYLGQWASSRIHENESLEQMMDPGIQGTVTTKALSRYADIVSLCIQPVKEFRPPMSEVVDSLIICSQKQNTAISKSGDITDLDSLNKSFRSTNSRFLGSPAYSYVSA 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0915 753 Gene3D Transferase(Phosphotransferase) domain 1 513 734 - -
Lele05g0915 753 SUPERFAMILY L domain-like 48 256 - -
Lele05g0915 753 MobiDBLite consensus disorder prediction 389 409 - -
Lele05g0915 753 Gene3D Ribonuclease Inhibitor 48 274 IPR032675 -
Lele05g0915 753 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 48 273 - -
Lele05g0915 753 ProSiteProfiles Protein kinase domain profile. 433 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0915 753 Pfam Leucine rich repeat N-terminal domain 49 87 IPR013210 -
Lele05g0915 753 Gene3D Phosphorylase Kinase; domain 1 397 511 - -
Lele05g0915 753 Pfam Protein tyrosine and serine/threonine kinase 437 708 IPR001245 GO:0004672|GO:0006468
Lele05g0915 753 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 398 511 - -
Lele05g0915 753 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 38 708 - -
Lele05g0915 753 SUPERFAMILY Protein kinase-like (PK-like) 408 710 IPR011009 -
Lele05g0915 753 Pfam Leucine rich repeat 178 219 IPR001611 GO:0005515
Lele05g0915 753 FunFam Leucine-rich repeat receptor-like protein kinase 512 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0915 Lele-ChrLele05 5637633 5641889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0915 21 753 Strubbelig Receptor Gene Family AT5G06820 54.595 0.0 742
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lele05g0915 PK_Tyr_Ser-Thr 1.6e-32 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0915 05 5637633 5641889 Lele07g0954 07 5711390 5715552 hybridization
Lele05g0915 05 5637633 5641889 Lele08g0774 08 4831699 4833160 hybridization