Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0913 ATGGACCCTTCGGAACTTAGGTACTTGGAGGATGAGGATACTCCAACAATGAAAACTGTCAAGGGTGCAACAACTGGTTTGGTTGCTGGCACTATCTGGGGGACCATCGTTGCGACCTGGAATGATGTTCCCCGTGTTGAGAGAAATGTTGCTCTTCCTGGTCTTCTAAGAACTTTAAAGATGATGGGAAACTATGGAATGACATTTGCTGCAATTGGAGGAGTCTACATTGGTGTGGAGCAATTAGTGCAGAAGTATAGGATGAAGAGAGACTTTGTGAATGGGGCCGTCGGTGGCTTTGTGGCTGGGGCAACTATTCTGGGTTACAAAGGAAGGAGCATCTCAACTGCAATTTCTGCTGGAACTGCATTAGCAGTCACTTCTTCAATTATTGACATTGGTGGTCAAACGACAAGAATTGACAATGGGAAGGAGTACTATCCTTACACCACCAAGAAAAGAACTAGCGTTGATTCATAA 480 0.4479 MDPSELRYLEDEDTPTMKTVKGATTGLVAGTIWGTIVATWNDVPRVERNVALPGLLRTLKMMGNYGMTFAAIGGVYIGVEQLVQKYRMKRDFVNGAVGGFVAGATILGYKGRSISTAISAGTALAVTSSIIDIGGQTTRIDNGKEYYPYTTKKRTSVDS 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0913 159 Pfam Tim17/Tim22/Tim23/Pmp24 family 18 127 - -
Lele05g0913 159 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 13 151 IPR039175 GO:0042721|GO:0045039
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0913 Lele-ChrLele05 5629556 5631254 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0913 05 5629556 5631254 Lele05g0913 05 5629556 5631254 ECH
Lele05g0913 05 5629556 5631254 Lele07g0952 07 5701062 5702576 hybridization
Lele05g0913 05 5629556 5631254 Lele08g0770 08 4813401 4817991 hybridization