Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0910 ATGAAGTTGTCAAACTCGCAAAAAGAAAGCGCCGCCGCCCCTAGTCAATCGGCCAAAGCTGTCAAGATGTTGCAGCGAGGGAGCACTCGCAAGGGCCCAACCTCAAGTTCTGAACAGGAAGGGCCTAAGACACCTGATCCTAAGACACTCAGAAGACTAGCTCAGAATAGAGAGGCAGCTAGGAAAAGCAGGCTTAGGAAAAAGGGCATATTCTTTGGAGGAGGATCGGGTGCAGTCTTGGGAGGAGAGCAGGGCCTTCCTGTCGCCATGAGTACCATTAGCTCAGATGCTGCAATGTTCGACGTGGAATACGGGAGATGGGTGGAGGAGCACCACCGGCTAGTTTGCGAGCTGAGAGCGGTGGTTCAAGAGCACCTGCCGGAGAACGAGCTGAGGCTATTTGTGGACAACTGCCTTGCTCATTACGACCAAGTTATGAACCTCAAGAGCATCATAGCTAAAACTGACGTCTTCCACCTTGTCTCCGGCATGTGGAAGACTCCCGCCGAGCGTTGCTTCATGTGGATCGGCGGATTCAGGCCATCTGAACTCATTAAGATAATTCTAAATCAAATAGAGCCGCTGACGGAGCAACAAATACTTGGGATCTGTGGGTTGCAACAATCCACACAAGAGGCAGAAGATGCTCTCTCGCAAGGTCTCGAAGCTCTGAATCAATCTCTCTCGGAAACCATAACGTCAGACTCGTTGAGCTCTACCCCTAATATGGCCAACTACATGGGACAAATGGCGCTGGCCATGAATAAGCTCTCCACCCTCGAAGGTTTCGTCAGACAGGCGGATAGTCTTCGGCACCAAACGATACACCGTCTGCACCAGATCCTAACGACCCGTCAGGCGGCGAGGTGTTTGCTGGCCATGGCGGAGTACTCTTATCGTCTGAGGGCCCTCAGCTCTCTGTGGGTGGCTCGCCCTCGCCAGGAATAA 948 0.5274 MKLSNSQKESAAAPSQSAKAVKMLQRGSTRKGPTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKGIFFGGGSGAVLGGEQGLPVAMSTISSDAAMFDVEYGRWVEEHHRLVCELRAVVQEHLPENELRLFVDNCLAHYDQVMNLKSIIAKTDVFHLVSGMWKTPAERCFMWIGGFRPSELIKIILNQIEPLTEQQILGICGLQQSTQEAEDALSQGLEALNQSLSETITSDSLSSTPNMANYMGQMALAMNKLSTLEGFVRQADSLRHQTIHRLHQILTTRQAARCLLAMAEYSYRLRALSSLWVARPRQE 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0910 315 MobiDBLite consensus disorder prediction 28 43 - -
Lele05g0910 315 MobiDBLite consensus disorder prediction 1 51 - -
Lele05g0910 315 Pfam Seed dormancy control 115 189 IPR025422 GO:0006351|GO:0043565
Lele05g0910 315 ProSiteProfiles DOG1 domain profile. 97 311 IPR025422 GO:0006351|GO:0043565
Lele05g0910 315 PANTHER TRANSCRIPTION FACTOR TGA9 22 314 - -
Lele05g0910 315 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 51 66 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0910 Lele-ChrLele05 5603818 5608288 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0910 14 315 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 62.798 2.23e-147 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele05g0910 DOG1 7.7e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0910 05 5603818 5608288 Lele07g0948 07 5672054 5677824 hybridization