Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0901 ATGGTCAGAAGAATTCGACCTGTAATTCCACCTCGAAAACATCCCTGCGACAAAATTCAAATGCTAAGCCATCTTCTTCATCTTGAACTCCTCTCTCGGAAATCTGTGACACCCAGCTTGGACACTGCACTTCATGGCGGACCTTCCAATGCTTTGCCGCCATTAACATGGGCAGCGAGGTTAAAGATTGCTCAAGGAGCTGCAAGGGGGTTAATGTACATACACGAGTTCAGTGGTCGAAAATACGTGCATGGCAACCTTAAATCAACAAACGTCTTGCTGGACGATGAACTCCATCCTTTCATATCTGGTTTTGGACTTACTCGCCTCTTGTCAAGTTGCTCAAAGTCCACAACAATGGCACCAAAGCGACAGAACTCCAAGCAGTCTATTGCAACCTCTGCAACGGCAGCTTCCCAAAACAACTACTTGGCACCAGAGGTGCGCATGAACGGAGGAAAATACACTCAGAAATGTGATGTGTATTCTTTTGGGATAGTGCTTTTAGAACTATTGACAGGACGGAGGCCAGAGAATGAGGGGGAAGTACTAGAGAGTTTCGTGAGGCAGGCTTTCAGAGAAGAGAAGCCCTTGTGCGAGATTATAGATCCTGCACTTCTGTCTGAGGTCCATGCTAAAAAACAAGTACTTGCAGCATTTCATCTTGCACTCAACTGCACAGAACACGACGCAGAGTTGCGACCGAGAATAAGAACGGTGTCGGAGAGCCTCGATCGCATCAAGGCACCGTGA 753 0.4728 MVRRIRPVIPPRKHPCDKIQMLSHLLHLELLSRKSVTPSLDTALHGGPSNALPPLTWAARLKIAQGAARGLMYIHEFSGRKYVHGNLKSTNVLLDDELHPFISGFGLTRLLSSCSKSTTMAPKRQNSKQSIATSATAASQNNYLAPEVRMNGGKYTQKCDVYSFGIVLLELLTGRRPENEGEVLESFVRQAFREEKPLCEIIDPALLSEVHAKKQVLAAFHLALNCTEHDAELRPRIRTVSESLDRIKAP 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0901 250 ProSiteProfiles Protein kinase domain profile. 1 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0901 250 Gene3D Transferase(Phosphotransferase) domain 1 37 250 - -
Lele05g0901 250 PANTHER OS01G0253100 PROTEIN 39 247 IPR045271 -
Lele05g0901 250 Pfam Protein kinase domain 62 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0901 250 SUPERFAMILY Protein kinase-like (PK-like) 38 244 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0901 Lele-ChrLele05 5560785 5563922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0901 39 249 Receptor kinase-like Gene Family AT3G57830 61.712 2.49e-83 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele05g0901 Pkinase 2.9e-18 CL0016