Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0899 ATGGAGCAAACTACGGGAGGTTTCACTGGATTCAGTTTCACTCCTGGTGAACGCGATCAAGCCGTACTTGAATCCATTCAATTCAACGAGGAAATCGAGCGAATCATAGCCCCTGCCCCAGACAACGTTAGCTCCTTCACTGCACTTCTCGACCTACCCTCAGCGCAGGCCAAGGAGATCCTCCACTCGCCCAACCCCGCCACCGCCTCCTCCGCCGCCGCTTACGGGGAACAACCCTCGTGCCATATCAGCGATCAGAAACCCCACATATTTCACTCTTTCAGTGGCCCTTTAACACTCCCTTCTGACACTGCTTTGATCGAACGCGCTGCCAAGTTTTCCGTGTTCGCCGAAGAGAACTCGTCGCCGGAGGAGCCCAACTTTGCCCCGCTTAGTTTGGGAGCAAATTTGAACAGAGTGAAGCATGAACCCCCGGAAACCGATTCAAATCCTAAGCCAACATCTGTTATGGCTTCGAACCCCCCGATTCGGTACAAGAACGAGAGGGCCGCAAAGAGGAAGGAACGAGAGAAGAAGGATAAAGAGTCCTCGAAGAAGAGTAAAAGAGTCGCCGACGAAACATCCGGAGACGGAGATAAACTTCCGTACGTTCATGTTCGAGCTCGTCGCGGTCAAGCTACAGACAGCCATAGCTTAGCAGAAAGGGCCAGGAGAGAGAAAATTAATGCTCGCATGAAGCTTTTACAAGAGCTGGTCCCCGGCTGCAATAAGATTTCAGGAACAGCATTAGTCCTGGATGAAATCATCAACCATGTTCAATCTCTTCAACGCCAAGTGGAGTTCTTGTCAATGAAACTAGCAGCAGTTAACCCACGAATTGATTTCGACCTTGACAGCATATTGGCTACAGAAGGTGCATCTCGAGTGGACTGCAACTTTCCCGACATGGTTACACCTCCAGGGAGGCAGGAAGTTCCAATCAATGGAAACAGACAGCAATATCAACAACAGTGGCAATTCGATGCATTTAACCAACCAATTTTGAGGAGGGAGGAAGAAAACTGTAATTTCATGACCACAGAAAACTCTCTCTTGAGTTATGACTCGTTGGCGAATTCAGCACCTCTTCAGCCGAATCATTTGAAGATGGAGCTGTGA 1119 0.4951 MEQTTGGFTGFSFTPGERDQAVLESIQFNEEIERIIAPAPDNVSSFTALLDLPSAQAKEILHSPNPATASSAAAYGEQPSCHISDQKPHIFHSFSGPLTLPSDTALIERAAKFSVFAEENSSPEEPNFAPLSLGANLNRVKHEPPETDSNPKPTSVMASNPPIRYKNERAAKRKEREKKDKESSKKSKRVADETSGDGDKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMKLAAVNPRIDFDLDSILATEGASRVDCNFPDMVTPPGRQEVPINGNRQQYQQQWQFDAFNQPILRREEENCNFMTTENSLLSYDSLANSAPLQPNHLKMEL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0899 372 SMART finulus 218 268 IPR011598 GO:0046983
Lele05g0899 372 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 108 341 IPR024097 GO:0006355
Lele05g0899 372 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 210 281 IPR036638 GO:0046983
Lele05g0899 372 MobiDBLite consensus disorder prediction 139 203 - -
Lele05g0899 372 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 212 262 IPR011598 GO:0046983
Lele05g0899 372 CDD bHLH_AtBPE_like 202 287 - -
Lele05g0899 372 Pfam Helix-loop-helix DNA-binding domain 216 263 IPR011598 GO:0046983
Lele05g0899 372 MobiDBLite consensus disorder prediction 166 203 - -
Lele05g0899 372 Coils Coil 252 272 - -
Lele05g0899 372 FunFam transcription factor bHLH48-like isoform X1 209 281 - -
Lele05g0899 372 Gene3D - 209 281 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0899 Lele-ChrLele05 5543671 5548053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0899 5 372 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 49.096 1.80e-99 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele05g0899 HLH 1.4e-05 No_clan