Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0881 ATGCTTGAACCATTCTTGTGTCTGATTAGATCCCCATTCTTGTTGTGCATCTTCATTGGCTTCTTGCTACATTCAGCTTTCACTTCTGAAATTTCACTGGGTTCAAAACTTTCTGTGGTTGACAAGGACAGTTGGGTCTCCTCCAATGGTGATTTCGCATTAGGATTCTTTAACATTTCAGATCAACCCAGCCAGTTTAGGATTGGCATTCGTTTCAATTCAAAGTCTATACCATTTAGCCAACAAACTGTGGTCTGGGTTGCTGGAGCTCATGTGACTGTGGGTAGCATGTCCTATTTCCAACTCACCCCAGAAGGAGAACTAGTCCTCTTTGATTCAGTACAGGGAGTAGTATGGACTAGTGGAACTGCCAACCAATCTGTAGTTTCCGCTGCCTTTCGTGACAATGGCAATCTTGAGCTCATAAACAGAAAGCAACATGCTGTTTGGCAGAGTTTTGATACTCCATCTGATACACTAGTCCCAGGGCAGAGTTTATCTGTATATCAAACACTCCGAGCTGCTAGCAAGCAAACCACGTCTAGTTACTACAGTCTTTACTTGAATGGCTCGGGACAGTTACATATTCGATGGGAAAGTAATATTACCTGTTGGACAAGTTACAACCCTTCTATTGCAAATCTGAGTGCTTCTCTCACAACCACTGGAGCCCTGCAACTTCAAGACCAAAGTTCAAAACCTGTTTGGTCAGTGTTTGGTGAAGACCACAATGAATCAGTGAGTTATAGGTTTCTTAGGCTTGATTTGGATGGCAATCTGCGCATATATTCATGGGTAGATACGTTACAATCATGGAGATCAGTATGGCAAGCTGTAGAGAATCAGTGCAAGGTTTTTGCCACTTGTGGTCAACGTGGTATGTGTTTCTTAAGTGCTTCAGGTTCTGCTGACTGCAGGTGCCCGTTTGACTTAGCTGACCCTAACAAATGTTTGGTTCCATACGATGAGGCATGTGAATCTGGCATCAATATGCTTACATATGAGAAAACTTTTCTATATGGAATTTACCCACCTGAAGATTCAATTACCATAAGTAGTTTGCAGCGTTGCAAAGAATTGTGTTTGAATGACCCACAATGTACGGTTGCAACCTTTACCAATGATGGAAGTGCTCAATGCTCAATAATGAAAACTAAGTATGTCACTGGCTATGCAGATCCATCTCTAACCTCAATATCTTTTGTTAAGAGATGTTCAGGTCCATTAGCCGTGAATCCTGGTCTTGTTAATTCACCTCCTCCAAAACAGCCTCCAGCACTTTGTGTTCCTTGTTTGGTAGGAGCAGCCTCTGCCACTCTTTTCTTCTTTGCCATCATACAGTTGGGAATTGGTTTCTGGATCTGCAGAAGAAGAAACATCACTAGGAAAGAAGTTACTTTAGCTTTAACAAGCCCAAACTCCAAGGGTTTGTTTATGTTGTCCTTCCCAGAGATAAAGAGCCTCACTGGGGATTTCAAGAACCAAATCGGTCCAAACATGTTCAAGGGTGCACTACAGAACAATCACTTGGTTGCAGTTAAGAATCTGAATGCGAGCATAGAAGAAAGGAAGTTCAGGAGTGCGGTTACAAAGATAGGAAGCATCCATCACAAGAACCTAGTGAAGCTGGAGGGCTATTGTTGTGAGTTCAATCACAGATTCTTGGTGTATGAGTATGTCAAGAATGGTTCTTTGGATAAGTACTTAGGTGATTCATCCCTTTGCAGGAGGCTAACTTGGAAAAAGAGACTTGAGATATGCTCAAGTGTGGCGAAATCCATTTGCTATTTGCACACCGAGTGTCGGGAGTTTCTTAGCCATGGAAATCTGAAGTGCGCAAATGTCTTAGTGGACGAAAACTCGGAAGCCAAGGTAACTGAATTTGGGTTTGCAAGAATAGATGGTGGGGCATCATATTGTGGTTCTTCAGCTGAGAAAGACGTGGAGGATTTTGGAAAGTTGGCGCTAACTCTGATATCTGGGCGTCAAGACACCGAGGATCTTTGCCTGTGGGCATACGAACAATGGATGGAAGGACAATCCAACAATGTTGTTGATAAAAGAGTTCATAGTGGAGTCGATTCGGACGGGCTAGAAAGCGCGTTAAGAATAATATTCTGGTGTCTTCAAATGGATGAACGTAGGAGGCCTTCAATGGGGGAAGTAGCAAGAATGCTAGATGGTATATTGAATGTTGATCTTCCACCACCTCCTTTTGCCGTCCAGAGGCCATTGCCAGAAGATGATGATACTTAA 2256 0.4286 MLEPFLCLIRSPFLLCIFIGFLLHSAFTSEISLGSKLSVVDKDSWVSSNGDFALGFFNISDQPSQFRIGIRFNSKSIPFSQQTVVWVAGAHVTVGSMSYFQLTPEGELVLFDSVQGVVWTSGTANQSVVSAAFRDNGNLELINRKQHAVWQSFDTPSDTLVPGQSLSVYQTLRAASKQTTSSYYSLYLNGSGQLHIRWESNITCWTSYNPSIANLSASLTTTGALQLQDQSSKPVWSVFGEDHNESVSYRFLRLDLDGNLRIYSWVDTLQSWRSVWQAVENQCKVFATCGQRGMCFLSASGSADCRCPFDLADPNKCLVPYDEACESGINMLTYEKTFLYGIYPPEDSITISSLQRCKELCLNDPQCTVATFTNDGSAQCSIMKTKYVTGYADPSLTSISFVKRCSGPLAVNPGLVNSPPPKQPPALCVPCLVGAASATLFFFAIIQLGIGFWICRRRNITRKEVTLALTSPNSKGLFMLSFPEIKSLTGDFKNQIGPNMFKGALQNNHLVAVKNLNASIEERKFRSAVTKIGSIHHKNLVKLEGYCCEFNHRFLVYEYVKNGSLDKYLGDSSLCRRLTWKKRLEICSSVAKSICYLHTECREFLSHGNLKCANVLVDENSEAKVTEFGFARIDGGASYCGSSAEKDVEDFGKLALTLISGRQDTEDLCLWAYEQWMEGQSNNVVDKRVHSGVDSDGLESALRIIFWCLQMDERRRPSMGEVARMLDGILNVDLPPPPFAVQRPLPEDDDT 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0881 751 ProSiteProfiles Bulb-type lectin domain profile. 157 275 IPR001480 -
Lele05g0881 751 ProSiteProfiles PAN/Apple domain profile. 325 405 IPR003609 -
Lele05g0881 751 Pfam S-locus glycoprotein domain 244 307 IPR000858 GO:0048544
Lele05g0881 751 Pfam PAN domain 341 403 IPR003609 -
Lele05g0881 751 PANTHER OS07G0415500 PROTEIN 13 739 - -
Lele05g0881 751 SMART blect_4 36 156 IPR001480 -
Lele05g0881 751 PIRSF SRK 1 641 IPR024171 GO:0004674
Lele05g0881 751 PIRSF SRK 637 750 IPR024171 GO:0004674
Lele05g0881 751 Gene3D Phosphorylase Kinase; domain 1 454 559 - -
Lele05g0881 751 ProSiteProfiles Bulb-type lectin domain profile. 30 154 IPR001480 -
Lele05g0881 751 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 560 638 - -
Lele05g0881 751 Gene3D Transferase(Phosphotransferase) domain 1 560 733 - -
Lele05g0881 751 ProSiteProfiles Protein kinase domain profile. 467 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0881 751 Pfam Protein tyrosine and serine/threonine kinase 506 635 IPR001245 GO:0004672|GO:0006468
Lele05g0881 751 CDD B_lectin 46 156 IPR001480 -
Lele05g0881 751 Gene3D Hepatocyte Growth Factor 339 407 - -
Lele05g0881 751 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 155 - -
Lele05g0881 751 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 168 IPR036426 -
Lele05g0881 751 SMART ntp_6 326 404 IPR003609 -
Lele05g0881 751 Pfam D-mannose binding lectin 83 172 IPR001480 -
Lele05g0881 751 Gene3D - 25 154 IPR036426 -
Lele05g0881 751 Gene3D - 155 279 IPR036426 -
Lele05g0881 751 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 456 559 - -
Lele05g0881 751 SUPERFAMILY alpha-D-mannose-specific plant lectins 171 274 IPR036426 -
Lele05g0881 751 SUPERFAMILY Protein kinase-like (PK-like) 501 726 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0881 Lele-ChrLele05 5420628 5422883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0881 445 737 Receptor kinase-like Gene Family AT4G05200 29.129 2.42e-37 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele05g0881 PK_Tyr_Ser-Thr 3.4e-21 CL0016