Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0875 ATGGAAATGGCACTCAATACGCACAGAGTTTCCTTTTCCTCCTCCATGGCTACTCCTTCTAGCTTTCGTAGGACCTCTTCTCCTCCCCAGTTTGCTAACCAACTACTTGGATTTCCTTTTTCTTCCTCAACGCCCACCAAACTACCTCTGCAATTTGTTTCCAGGGACTCTACTTACGGGCCCATCAAATGCTCCGTTTCTGAAGTTACTGATCCTAAGACTGAGAAAAAGAAGCTGGAGACAAGAAGAGACATAAGAAACATTGCAATTGTGGCTCATGTTGATCATGGAAAAACAACTTTAGTTGATGCGATGCTGAAACAAACAAAGGTATTTCGTGATAATCAATTTGTACAGGAAAGAATAATGGATTCAAATGATTTGGAGCGTGAAAGAGGAATTACAATCCTAAGTAAAAATACATCTGTCACCTATAAAGACACCAAGATTAATATAATAGATACTCCAGGTCACTCTGATTTCGGAGGTGAAGTGGAGCGCATTCTAAATATGGTGGAAGGAATCCTTTTAGTGGTAGATTCTGTTGAAGGTCCAATGCCACAGACAAGATTTGTTTTAAAGAAGGCCCTAGAGTTTGGGCATGCAGTTGTTGTTGTTGTCAATAAAATTGATAGACCTTCTGCTAGGACGGACTTTGTTGTCAATTCTACTTTTGAACTGTTTCTTGAACTAAATGCGTCAGATGAACAGTGTGACTTCCAAACAATATATGCTAGTGGCATAAAGGGACAAGCAGGACTATCTCCTGAAGATTTGGCAGGAGATCTTGGCCCATTGTTTGAAGCTATAATCAGATGCATCCCTGGACCACATATTGACAAAGATGGTGCACTGCAAATGCTTGCTACAAATACTGAGTATGATGAACATAAAGGGCGTATAGCAATTGGACGCTTGCAAGCTGGAGTGTTAGAAAGGGGCATGGATGTCAGGGTATGTACTACTGAAGATTCATGCAGATATGGAAGAATTAGTGAGCTTTTTGTGTATGACAAATTCAGTAGGGTCCCTGCAGAACGTGTGGAGGCTGGTGATATATGTGCTGTATGTGGAATTGCTGATATTCAGATTGGGGAAACAATTGCTGACAAAGTACACGGGAAGCCACTGCCATCCATCAGGGTGGAAGAACCTACAGTGAAAATGTCTTTTTCTATAAACACTTCACCTTTTGTTGGGCGGGAGGGAAAGTATGTTACTAGTAGGAATTTAAGGGATAGGCTCTATCGTGAGCTAGAGCAAAATTTGGCCATGAAAGTTGAAGATGGTGAAACTGCAGATACCTTTATGGTCAGTGGTCGTGGTACTTTGCACATAACCATACTCATAGAAAATATGCGAAGGGAAGGATATGAATTCATGGTAGGTCCTCCCAAAGTTATAAACAAGAAAGTGGGTGACCAACTGCAGGAACCATATGAGATAGCCACCGTAGAGGTACCAGAGGAACATATGGGAGCTGTTGTTGAACTTCTGGGCAAGAGACGAGGACAAATGTTCGATATGGAAGGAGTTGGATCGGAAGGAACTACCCTACTAAAATATAAGATTCCAACCCGTGGCCTTTTGGGATTGCGGAATTCAATGTTAACGGCTTCCCGTGGAACAGCAATTCTCAACACTATCTTTGATAGCTATGGGCCTTGGGCTGGGGACATCAGTACTCGGGATCAAGGCTCACTGGTTGCTTTTGAAGATGGAACAAGTACTTCTTATGCGCTTGCTAGTTCACAGGAGAGAGGACAGATGTTTATTGGTCCTGGAGCGGATGTTTACAAAGGTCAAATTGTTGGCATCCATCAGCGACCTGGGGATTTGTCCTTAAATGTTTGCAAGAAAAAGGCTGCAACAAACATTCGTTCCAACAAGGAACAAACAGTGGTTCTTGATACACCGTTGGATTATAGTCTGGATGACTGCATCGAATACATCCAAGAAGATGAGCTAGTTGAGATCACTCCCCAAAGCATCCGAATGTGCAAGAATCCTAAACTAGCAAAGAAAACAAGGTAG 2034 0.4233 MEMALNTHRVSFSSSMATPSSFRRTSSPPQFANQLLGFPFSSSTPTKLPLQFVSRDSTYGPIKCSVSEVTDPKTEKKKLETRRDIRNIAIVAHVDHGKTTLVDAMLKQTKVFRDNQFVQERIMDSNDLERERGITILSKNTSVTYKDTKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARTDFVVNSTFELFLELNASDEQCDFQTIYASGIKGQAGLSPEDLAGDLGPLFEAIIRCIPGPHIDKDGALQMLATNTEYDEHKGRIAIGRLQAGVLERGMDVRVCTTEDSCRYGRISELFVYDKFSRVPAERVEAGDICAVCGIADIQIGETIADKVHGKPLPSIRVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELEQNLAMKVEDGETADTFMVSGRGTLHITILIENMRREGYEFMVGPPKVINKKVGDQLQEPYEIATVEVPEEHMGAVVELLGKRRGQMFDMEGVGSEGTTLLKYKIPTRGLLGLRNSMLTASRGTAILNTIFDSYGPWAGDISTRDQGSLVAFEDGTSTSYALASSQERGQMFIGPGADVYKGQIVGIHQRPGDLSLNVCKKKAATNIRSNKEQTVVLDTPLDYSLDDCIEYIQEDELVEITPQSIRMCKNPKLAKKTR 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0875 677 CDD BipA_TypA_C 478 557 IPR035651 -
Lele05g0875 677 SUPERFAMILY Translation proteins 232 379 IPR009000 -
Lele05g0875 677 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 124 139 IPR031157 -
Lele05g0875 677 FunFam GTP-binding protein TypA 563 649 - -
Lele05g0875 677 Pfam Elongation factor G C-terminus 476 561 IPR000640 -
Lele05g0875 677 PRINTS GTP-binding elongation factor signature 87 100 IPR000795 GO:0003924|GO:0005525
Lele05g0875 677 PRINTS GTP-binding elongation factor signature 203 212 IPR000795 GO:0003924|GO:0005525
Lele05g0875 677 PRINTS GTP-binding elongation factor signature 131 139 IPR000795 GO:0003924|GO:0005525
Lele05g0875 677 PRINTS GTP-binding elongation factor signature 151 161 IPR000795 GO:0003924|GO:0005525
Lele05g0875 677 Gene3D bipa protein 563 642 IPR042116 -
Lele05g0875 677 Pfam Elongation factor Tu domain 2 299 368 IPR004161 GO:0005525
Lele05g0875 677 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 83 278 IPR000795 GO:0003924|GO:0005525
Lele05g0875 677 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 556 669 - -
Lele05g0875 677 SMART EFG_C_a 475 564 IPR000640 -
Lele05g0875 677 FunFam GTP-binding protein TypA 386 490 - -
Lele05g0875 677 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 286 IPR027417 -
Lele05g0875 677 FunFam GTP-binding protein TypA 279 379 - -
Lele05g0875 677 TIGRFAM TypA_BipA: GTP-binding protein TypA/BipA 85 673 IPR006298 GO:0003924|GO:0005525
Lele05g0875 677 Gene3D Elongation Factor G (Translational Gtpase), domain 3 386 669 - -
Lele05g0875 677 CDD BipA_TypA_II 285 378 - -
Lele05g0875 677 Gene3D - 82 278 IPR027417 -
Lele05g0875 677 CDD BipA_III 385 463 - -
Lele05g0875 677 Gene3D Translation factors 279 379 - -
Lele05g0875 677 FunFam GTP-binding protein TypA 469 562 - -
Lele05g0875 677 FunFam GTP-binding protein TypA 82 278 - -
Lele05g0875 677 Pfam Elongation factor Tu GTP binding domain 84 275 IPR000795 GO:0003924|GO:0005525
Lele05g0875 677 CDD TypA_BipA 84 277 - -
Lele05g0875 677 SUPERFAMILY EF-G C-terminal domain-like 383 467 IPR035647 -
Lele05g0875 677 SUPERFAMILY EF-G C-terminal domain-like 478 593 IPR035647 -
Lele05g0875 677 Gene3D - 469 562 - -
Lele05g0875 677 TIGRFAM small_GTP: small GTP-binding protein domain 85 219 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0875 Lele-ChrLele05 5384200 5391236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0875 83 212 Eukaryotic Initiation Factors Gene Family AT3G22980 43.939 2.98e-24 106