Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0840 ATGTCAAAACTTTCCATGGCAAAGTGGAAGTGCTGGGTCGGATGGGTGAAAAGGCTCTTCACTCCTGAGTCAAAGGCCAAAAAGCCAAAGAAATGGGGATGGAGTCTTGGAAGGTTTAAGCTGAAACAATGTCCAACACTTACAGCACCAAATAGAGAACTTACTAAAGCAAGTGAAGAGCAGAGAAAGCATGCTTTGTCTGTGGCTATTGCAACAGCAGCTGCTGTAGAAGCTGCTGTTGCTGCTGCTCATGCTGCTGCTGAGGTTGTCAGGCTAACCGGTTCATCCCGATCCTATTCTTATATATGCAAAGGCAATCGGAACTTGGCTGCCTCTAAAATTCAAAGCGCATACCGTGGACATCTTGCTAAGAAAGCATTGAGAGCATTGAAGGGAGTTGTGAGACTTCAAGCTATAATTCGTGGTCAAGCTGTGAGACGTCAAGTGTTCAGCATTTTGAAGCATTTGCCTTCCAGTGAAAGAGAGCTGGTAGAAATCCATGAAAGAAACAGTCATACTGCAGAAAACAGCTACAAGAATGACAAGAGCAATCAGTCTCTAAGGCAGAAAAAGAAGTTGGAAGAGAGGGAGATTAAGGAGAAATTCCATCCTGAATGCCATGGTCAAAGGACTTGGGATTGCAGTTTGCATTCAAAAGAAGACATAGAAGCCATACGGTTGAGAAAACAAGAGGCCGCTATTAAAAGAGAACGCATGAAACAGTATTCCTTCTCACACAGGGTAATCTCATTTGACTTCATCTTAGAGAGAAAAAGTTCTCACATGATAGAAGAACATGGAAGAGAGAGCTGCCGTACTCTAGGAAAATGGATGCAGGAAGAAACATGTAACAAGGATGCATTTAATAAACCAGATCTTCTCTCAAACCTGATCACAAGAGACTTCCATGGTTCAACACAAGACGCACTGAAAAGTGCGAAAAGAGAAGATTCACAGGAACAATTGATTTCACAAATTTCACTCCCAAGGAAATCATTTTCTCACGTAAAGGAAGTGTTACTTGTAGATAATAGTTCCATGCCAAATCCTCCGGTTTTCCCCACTTACATGGCTGTGACGGAATCTGCTAATGCAAAGGCAAGATCTATAAGCACACCAAGGCAAAGAACAGAGTTTCTGGAACTATGCCTCAATCAAAGTGAGCCTCATGAGGAAGGCGTATCGTTTTGGTCTTCTCCTTATGGTGAGCTTGCCAGCACCAATATAATGCAGAGACGTCAGAGTGCAGATCCCCATCATTATCACTAG 1269 0.4295 MSKLSMAKWKCWVGWVKRLFTPESKAKKPKKWGWSLGRFKLKQCPTLTAPNRELTKASEEQRKHALSVAIATAAAVEAAVAAAHAAAEVVRLTGSSRSYSYICKGNRNLAASKIQSAYRGHLAKKALRALKGVVRLQAIIRGQAVRRQVFSILKHLPSSERELVEIHERNSHTAENSYKNDKSNQSLRQKKKLEEREIKEKFHPECHGQRTWDCSLHSKEDIEAIRLRKQEAAIKRERMKQYSFSHRVISFDFILERKSSHMIEEHGRESCRTLGKWMQEETCNKDAFNKPDLLSNLITRDFHGSTQDALKSAKREDSQEQLISQISLPRKSFSHVKEVLLVDNSSMPNPPVFPTYMAVTESANAKARSISTPRQRTEFLELCLNQSEPHEEGVSFWSSPYGELASTNIMQRRQSADPHHYH 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0840 422 Pfam Protein of unknown function (DUF4005) 349 378 IPR025064 -
Lele05g0840 422 SMART iq_5 106 128 IPR000048 GO:0005515
Lele05g0840 422 ProSiteProfiles IQ motif profile. 107 135 IPR000048 GO:0005515
Lele05g0840 422 ProSiteProfiles IQ motif profile. 131 158 IPR000048 GO:0005515
Lele05g0840 422 Gene3D - 101 156 - -
Lele05g0840 422 PANTHER IQ-DOMAIN 5-RELATED 9 398 - -
Lele05g0840 422 Pfam IQ calmodulin-binding motif 110 128 IPR000048 GO:0005515
Lele05g0840 422 MobiDBLite consensus disorder prediction 170 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0840 Lele-ChrLele05 5126198 5127877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0840 6 408 IQD Protein Family AT5G03960 42.280 3.99e-66 214