Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0817 ATGGGAATGGCCTGCGAATCCCAATTTCACGTGTTGGCTGTCGACGACAGCATAATCGATCGAAAGCTTATTGAGAGGCTCCTTAAAACCTCCTCCTATCAAGTTACCACCGTTGATTCCGGTAGCAAGGCTTTAGAGTTTCTGGGTTTGCGTGGCAATGATCAGACCGACCCTAATACACCTTCCGTGTCTCCTCGCAGTAATCAGGAAGTGGATGTGAACCTTGTTATTACCGACTACTGTATGCCCGGCATGACTGGCTATGACTTACTCAAGAAAATCAAGGAATCTTCGTCTTTGAGAAACATACCAGTGGTGATCATGTCATCCGAAAATGTGCCTTCGAGGATTAGCAAATGCTTAGAAGAAGGAGCAGAGGAATTTTTCTTGAAACCAGTGAAGCCAGCAGATCTCAATAGGCTTCGACCCCATATGATGAAGACCCAGAAATTGAAGTATGAAGCACATAAAAGAGATGAAAAGCATGAAACCCCAGAGATTGAACTAGCACCACAATCCCTGGTAGAACAACATCATCAACAGTCACTGCAGATAGTCAACACTAACAAGAGGAAAACCGTGGAAGAGGGGCTTTCTCTTGAAACTGATAGAACAAGGACAAGATTCAATGGCATAGCCACTATGGTCTGA 651 0.4455 MGMACESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLRGNDQTDPNTPSVSPRSNQEVDVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISKCLEEGAEEFFLKPVKPADLNRLRPHMMKTQKLKYEAHKRDEKHETPEIELAPQSLVEQHHQQSLQIVNTNKRKTVEEGLSLETDRTRTRFNGIATMV 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0817 216 Pfam Response regulator receiver domain 11 139 IPR001789 GO:0000160
Lele05g0817 216 SMART REC_2 9 142 IPR001789 GO:0000160
Lele05g0817 216 Gene3D - 10 211 - -
Lele05g0817 216 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 190 IPR045279 GO:0009736
Lele05g0817 216 CDD REC_typeA_ARR 11 141 - -
Lele05g0817 216 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Lele05g0817 216 SUPERFAMILY CheY-like 8 154 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0817 Lele-ChrLele05 4892637 4893916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0817 1 216 Response Regulator Gene Family AT3G57040 62.810 2.24e-93 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele05g0817 Response_reg 2.8e-20 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0817 05 4892637 4893916 Lele05g0817 05 4892637 4893916 ECH
Lele05g0817 05 4892637 4893916 Lele07g0855 07 4950788 4952056 hybridization
Lele05g0817 05 4892637 4893916 Lele08g0662 08 4036244 4039097 hybridization