Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0800 ATGCATCACAGTGAAGGAGATGTGGACGCTATTTATTATTCTATTGAAGTTGTTCGCTTGCCTTCTTGTGAAGTCTTGATCATCCTCAACTCCCAAACAAGCTTCAACTCACTTTTACCTGTGACCCTTTCAAGGCGTTACCTTTATCAGAAGCTGGGGAGGAGGAACAATAGCAGTTACGTTAGCATGAAGGGATGTGGAAGGAATTTGATTCGAACAATTGGGGCACAAAATGCTGCTTGGGGAAAAAAAGAAGCGAAAGACGACTACGGAAAGTTGTGGGAGACGGTGTTGGAAACCCCTGTGGTCATGCCTTACCTTGTCCGAGAGAAATTGTTTATTGGTGATATCAGTGACGCTGCGGAGATCCTTCAAAATGGTAGCGATGAAATCACTCATATTTTATCGGTTCTTAGCTCGGCTTCAATATCATTCTTTTCCGAATGGCGAAGTAGCCTAACCATCCCGGCTAAGGAAATTAAGAAGGTATATGTGGGTGGGGATCATGGTGATGACACTGATGATAACCTGGGTGATATATCAAAGAGTCCGTTGTCACGGGAGAACCTTTTGTACTCGTTGGAATATGCAGGCAAGGATTTGAAGTTGGTTAGGATGGCTGTCCCTCTGAGGGATACAGAAAATGAAAATTTGTTGGATTACTTGGATGTTTGCCTTAATTTTATTGATCGAGGTAGGAAAGATGGTTCTGTTTTGGTGCACTGCTTTGCTGGAGTATCAAGAAGTGCATCAATCATTACAGCATATCTGATGAGATCTGAACATCTATCTCAAGAAGATGCCCTTCAATCATTAAGGAAGAGTTGTGAATTTGTTTGCCCTAATGATGGTTTTCTCGAAAAGTTAAAAATGTTTGAGGAGATGGGCTTTAAGGTAGATCGCTCTAGCTCTATATACAGGCGCTTTCGTTTGAGAGTACTGGGTGAGAAGTATAACTCGGGGGAGAGAATAGACAGTTCTAAACTTGGAGCTGATCCTGGAATGCCTGTTAGTGTTGCTTCAGAAGTAGAAGGAGCTTCAAATGCAGGAAATAATCGCAGTCCTACATTTCGCTGTAAGAAGTGCCGGCGTATAGTTGCATTGAAGGAACATGTTGTAGACCACGTGCCAGGTGAAGGCGAGACATCCAGCCAGTGGAAGAAATGGAGAAGTGACAGCCTCTTTAACAAATGCAATGAATTTGAGTGTTCTTCCATATTTATTGAGCCACTACAATGGATGAAAGCAGTTGAGGAAGGTGCATCGGAGGGGAAGTTGAGCTGTGCCCATTGTGACGCCCGCTTGGGAAACTTCAATTGGTTTGGCATCCAATGCAGCTGCGGAAGCTGGATAACCCCTGCCTTTCAGATCCACAAGTGCCGAGTGGACGCTAGCCCTATCTAA 1404 0.4395 MHHSEGDVDAIYYSIEVVRLPSCEVLIILNSQTSFNSLLPVTLSRRYLYQKLGRRNNSSYVSMKGCGRNLIRTIGAQNAAWGKKEAKDDYGKLWETVLETPVVMPYLVREKLFIGDISDAAEILQNGSDEITHILSVLSSASISFFSEWRSSLTIPAKEIKKVYVGGDHGDDTDDNLGDISKSPLSRENLLYSLEYAGKDLKLVRMAVPLRDTENENLLDYLDVCLNFIDRGRKDGSVLVHCFAGVSRSASIITAYLMRSEHLSQEDALQSLRKSCEFVCPNDGFLEKLKMFEEMGFKVDRSSSIYRRFRLRVLGEKYNSGERIDSSKLGADPGMPVSVASEVEGASNAGNNRSPTFRCKKCRRIVALKEHVVDHVPGEGETSSQWKKWRSDSLFNKCNEFECSSIFIEPLQWMKAVEEGASEGKLSCAHCDARLGNFNWFGIQCSCGSWITPAFQIHKCRVDASPI 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0800 467 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 104 464 - -
Lele05g0800 467 Gene3D Protein tyrosine phosphatase superfamily 107 315 IPR029021 -
Lele05g0800 467 ProSiteProfiles Dual specificity protein phosphatase domain profile. 104 298 IPR020422 GO:0006470|GO:0008138
Lele05g0800 467 FunFam Dual specificity protein phosphatase 12-like 107 315 - -
Lele05g0800 467 ProSitePatterns Tyrosine specific protein phosphatases active site. 240 250 IPR016130 GO:0016311|GO:0016791
Lele05g0800 467 CDD DSP_DUSP12 107 300 - -
Lele05g0800 467 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 216 274 IPR000387 GO:0016311|GO:0016791
Lele05g0800 467 SMART dsp_5 104 295 IPR020422 GO:0006470|GO:0008138
Lele05g0800 467 Pfam Dual specificity phosphatase, catalytic domain 202 294 IPR000340 GO:0008138|GO:0016311
Lele05g0800 467 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 106 298 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0800 Lele-ChrLele05 4772605 4778629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0800 203 294 Protein tyrosine phosphatase (PTP) family AT3G06110 36.559 1.13e-14 70.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0800 05 4772605 4778629 Lele05g0800 05 4772605 4778629 ECH
Lele05g0800 05 4772605 4778629 Lele07g0840 07 4830596 4836291 hybridization
Lele05g0800 05 4772605 4778629 Lele08g0646 08 3910948 3922164 hybridization