Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0780 ATGGTGCCCAACACGTGCATCAGGGGTTGCTGTACCAGCACTTCTATTCCTCTCCACGTTCCTCCTTCCTCTTATTCTCTTTTATCTCCAATTGCCAGAGGGGCGGAGAGTGTTGTTTACGAAGGGGCTTTAGATGGTAACAAGGTTGCTGTCAAAAAACCTATCCTGTCAACTGCAGAAGACATTAACAAGTTCCACAAAGAATTACAGCTGTTATGCAAGTTAGATCACCCGAGGATAGCCACACTGATCGCTGCCCATGCAAAACCGCCCAATTACCTCTTTTTCTTCAAATTCTATGAATCTCTCAACCTTGCACAAAAGTTACACTTGGAAGAATGGACCCCGAGTATCAATTATGCACTCATGATAATAATTCAGTTAGCCAAAGCTTTGCAGTATCTTCATAACCTCGGGATATTACATAGAGACGTGAAACCAGCAAATATTCTTCTTGACGAAAATCTTTATCCACACCTCACAGATTTTGGTTTGGCGGAATACAAGAGTGACCTTAAGAGAGTCTCTCTTGAAAATTGGAAGTCTTCTGGCAAGCCTACTGGTGGTTTTCATAAAAAAAATATGGTTGGAACTCTAATTTACATGGCACCTGAAATATTAAGGAAGGAGTTGCACACAGAAAAATCTGATGTCTACAGTTTTGGGGTGACAATCAACGAACTCCTTACAGGTGTTGTGCCATATACTGATCTTCGTGCAGAAGCACAGGCTCACACAGTACTGGAGATGAATTATACAGAGCAGCAACTAACAGCAGCTGTTGTTTCTGATGGATTAAGGCCAGTCCTTGCTGCTCAGGGGTCGGATGTACCTTCAAGATTATTAGCATTAATACAGAGATGCTGGGATTCAAAACCTGAAAGTAGACCTTCCTTTGATGATATAGTTAAGGAGCTTGATTCCATCATTGAACACAGAAGGGACGTTGATGATAGCAGATACCTCAGACCTTGTAAGTTGCATGATAATCAGGTTGTAGACAGAAGCAATAATAATCACCTTCAGGCTTATCAAGGGAGTATTAACTGGTCTACCGTGGGAGAACTTTTCTCAAAGAGATCCTTCAGTGCAACTGATTCTAAATTGAGAGCCTGGCATAGGTCTTTTGATGAGCCTTTGGCTCACTGTCCAACACTTTGTTGGGGATCTTATGCTACCTGTGGGAGAAGGGAAACCATGGAGGACACACATTTCATTCTTCCCAGCATTTGCAATGAAAAGGACATGCATGCTTTTGGTATCTTTGATGGTCATAGAGGTGCAGCAGCTGCTGAGTTTTCTGCTCAAGCCATGCCAGGATTCCTGCAATCTTTAAGTTCTACGGGGAGTCCAGCTACCACACTCGTTGAGGCATTCCTTAAAACAGATGTTGCCTTCAGAGAAGAGATTGATTCCTGTCGTAAATCCAGAAGAGTTACCCAGAAGGATTGGCATCCTGGTTGTACAGCCGTCACCGCTCTTGTAGTCAGAAACAAGCTTTTTGTTGCAAACAGTGGCGATTGCAGAACAATCTTATGCCGGGCAGGTTCGCCCATTGCTCTCACCAAAGATCATGTCGCTAGCTGTCCTGAAGAGAGAGAACGTGTAATTCGTAATGGAGGGCAAGTTCACTGGCAAGTTGATACCTGGAGGGTTGGCCTTCCTGCACTTCAGGTTACTCGTTCCATTGGGGACGACGATCTGAAGCCGGCTGTAACTGCAGAACCGGAAATAACTGAAACTACTCTATCCGCAGACGATGAATATTTGGTGATGGCGAGTGATGGACTGTGGGATGTGATGAGCAATAAAGAAGTGATAAGCATAATCAAAGATACAGTGAAAGAACCAGGAATGTGTTCGAAGAGGTTGGCGACTGAGGCAGTGGAACGAGGTAGCAAAGACAACATAACGGTCATTGTGGTTTTCTTGCTCCCTGTGTCTACAGCAGAGAGAATTTATTAG 1965 0.4392 MVPNTCIRGCCTSTSIPLHVPPSSYSLLSPIARGAESVVYEGALDGNKVAVKKPILSTAEDINKFHKELQLLCKLDHPRIATLIAAHAKPPNYLFFFKFYESLNLAQKLHLEEWTPSINYALMIIIQLAKALQYLHNLGILHRDVKPANILLDENLYPHLTDFGLAEYKSDLKRVSLENWKSSGKPTGGFHKKNMVGTLIYMAPEILRKELHTEKSDVYSFGVTINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSDGLRPVLAAQGSDVPSRLLALIQRCWDSKPESRPSFDDIVKELDSIIEHRRDVDDSRYLRPCKLHDNQVVDRSNNNHLQAYQGSINWSTVGELFSKRSFSATDSKLRAWHRSFDEPLAHCPTLCWGSYATCGRRETMEDTHFILPSICNEKDMHAFGIFDGHRGAAAAEFSAQAMPGFLQSLSSTGSPATTLVEAFLKTDVAFREEIDSCRKSRRVTQKDWHPGCTAVTALVVRNKLFVANSGDCRTILCRAGSPIALTKDHVASCPEERERVIRNGGQVHWQVDTWRVGLPALQVTRSIGDDDLKPAVTAEPEITETTLSADDEYLVMASDGLWDVMSNKEVISIIKDTVKEPGMCSKRLATEAVERGSKDNITVIVVFLLPVSTAERIY 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0780 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Lele05g0780 654 Gene3D - 382 646 IPR036457 -
Lele05g0780 654 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 20 313 - -
Lele05g0780 654 SUPERFAMILY PP2C-like 382 644 IPR036457 -
Lele05g0780 654 CDD PP2Cc 389 644 IPR001932 -
Lele05g0780 654 FunFam Protein kinase and PP2C-like domain-containing protein 15 340 - -
Lele05g0780 654 Pfam Protein kinase domain 26 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0780 654 SMART PP2C_SIG_2 402 644 IPR001932 -
Lele05g0780 654 SMART serkin_6 25 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0780 654 FunFam Leucine rich repeat protein phosphatase 2c domain containing protein 379 648 - -
Lele05g0780 654 ProSiteProfiles Protein kinase domain profile. 25 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0780 654 Gene3D Transferase(Phosphotransferase) domain 1 14 340 - -
Lele05g0780 654 Pfam Protein phosphatase 2C 392 637 IPR001932 -
Lele05g0780 654 SMART PP2C_4 377 642 IPR001932 -
Lele05g0780 654 ProSiteProfiles PPM-type phosphatase domain profile. 387 644 IPR001932 -
Lele05g0780 654 SUPERFAMILY Protein kinase-like (PK-like) 17 331 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0780 Lele-ChrLele05 4607483 4612007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0780 94 654 PP2C-type Phosphatase Gene Family AT2G40860 66.252 0.0 777
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Lele05g0780 Pkinase 6.9e-46 CL0016