Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0779 ATGGTGGGCGAACCAACCGAGGCCTCTAACAACGAAGAGATAGGGACAAGTAATAATCAGCAGCAGCAGCGAATATTCTCTTGCCAGTTTTGCGACAAGAAGTTCCATAGCTCTCAAGCACTGGGAGGGCACCAGAACGCTCACAAACGTGAGCGTGTACTCAGAAAAATTGAGAAAGAGCTTGATATGGGCACTTTTGGTCCTCGCTTTTGCCCTTGTTATTCCACCATCCCTGCTCTTCCCTACACCGGGTCACCTTTTTATCCAGTTCCTCATCATTATCATGTCAACCCATCCCTGGCTCCTTACGGCTTACACCAGCAGGGGCTAGCCAACTCGGCCCCGGAGGCCTTCCGGTTTGGCTTGAGAAGCTCATGGGCCGCCGATGAAGGAGCGGTTCAGCGCAGATCGAACCGCAGAAGCAATGTTCAGGATTCTTCATCACCTTCAAATACAAAGCCATCAGATGAATCAGGAGGTACAAGTGCAGGAGGATCCGGGAGGAACTCATATATGGGAAGCATTCATGATCCATCACCAGGCCTCGACTTGACTCTCAGGCTTTGA 567 0.5097 MVGEPTEASNNEEIGTSNNQQQQRIFSCQFCDKKFHSSQALGGHQNAHKRERVLRKIEKELDMGTFGPRFCPCYSTIPALPYTGSPFYPVPHHYHVNPSLAPYGLHQQGLANSAPEAFRFGLRSSWAADEGAVQRRSNRRSNVQDSSSPSNTKPSDESGGTSAGGSGRNSYMGSIHDPSPGLDLTLRL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0779 188 ProSitePatterns Zinc finger C2H2 type domain signature. 28 48 IPR013087 -
Lele05g0779 188 MobiDBLite consensus disorder prediction 131 188 - -
Lele05g0779 188 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 8 188 IPR044246 GO:0009788
Lele05g0779 188 MobiDBLite consensus disorder prediction 137 173 - -
Lele05g0779 188 Gene3D Classic Zinc Finger 6 64 - -
Lele05g0779 188 ProSiteProfiles Zinc finger C2H2 type domain profile. 26 53 IPR013087 -
Lele05g0779 188 MobiDBLite consensus disorder prediction 1 20 - -
Lele05g0779 188 SUPERFAMILY beta-beta-alpha zinc fingers 23 53 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0779 Lele-ChrLele05 4603973 4604539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0779 11 188 C2H2 Transcription Factor Family AT1G24625 32.222 3.19e-14 66.2