Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0776 ATGGGAAAGACCGAAGAAGAGCAGCCTTTGCCTTCCAGTGTGGCCTCCGGTGATACCGAGCAGAATGTGGAGGTAAACTGTGGGTGTAGATGTTCAAAAATTCGGAAATTCATTGGCCTCAGATGCATTTTCGTCCTGCTGCTATCTGTTGCTTTGTTCCTCTCTGCTTTATTCTGGTTACCCCCATTTCTTCGGTACGCAGATCAGAAGTATCTGGGCTCCGATTCAAAATATAAAGGTCATGATATTGTTGCAAGTTTTATTGTTAAGAAGCCAGTCTCTCTGCTGCAAGACTACATTTCGCAGCTCGTAGATGACATTTTTGATGAGATATTAGTTCCCTCTACCAAAGTGGTGATATTGTCTCTTGATCCCCTGGCTGGGTCAAACATGACCAAAGTGGAGTTTGCTGTTGATCCTGATAATAAATACTCTGGAATGTCTTCAGCTTCTGCTAGTTTGATCAGATCGTCTTTCGAATCTCTGATTGCTGGCCAAACAGTTCTCAGGCTGACTTCGTCCTTGTTTGGAAATCCCTTCTCTTTTGAAGTGCTAAAATTTAAGGGAGGAATTACTATAATTCCTAGACAGCACGCATTTCTTCTGCAGAGGCCACAAACACTGTTCAACTTTACTTTAAATTTCTCTATTCGTGAAATACAATCGAATTTCAATCAATTGACAAATGAGTTAGAGTCTGGACTACATCTGGCATCATATGAGAACTTGTATGTCATCTTATCGAATTCTGAAGGTTCAACAGTGGCTGCTCCTACTATTGTTCAATCGTCCATTTTATTTGCAGTTGGGAATGGGGATATTCCATCGAGGGAGAGGTTAAAGCAACTGGCAAAAACCATCACAGGATCTCATTCAAGGAACCTTGGCTTGAACAACACTGAATTTGGTAGGGTTAAGCAGGTTCGGCTTTCATCCATCTTGCAACACTCCCTTAATGGTAGTGATGGCAGTGGCACTTCTTGGTCGCCAGCTCCTGTTCCTCTGCCTCATTCACCCCTCCACCACCACCACCACCACCACCACCACCACCACCACCACCACCATCACCATCACCACCACCCCCACCCCCACCACAATGCCCATCTTGTTCCTGCAACTTCACCTACACCAGCACCTGAAATCGGAAAACATGCAACTCCACCTGGAATCGGTTCCCCTGCACCTGCAAAAAATGTGCCTCCAGAAGGGAGGAGTTCTCGAGCTGAGCCTCCTGTTTGTCAATTTGGGCATAGAAAGAGGTCTTCCCAAAATGCTGGAAAACATCCTCATTTGACACCTGCGGCTGCACCTAACATTGCTGCACACTATCCCGTTGCCTCACCAAAGAAACAAGTTGAACCACCGGGACTTGTTTCTCGTTCAGTTCCTGTATCAAGTCCTTTGCCAAATGTGGCTTTTGCGCATGCTGAGCCCCCTCCTAAGACTGAACCAGCTAGAGAACGTTCTAGCACACATTCTCACGAGCCATCACCATCTCCATCTTCTGGAGGTACACGTGTGACTGAGAAATGGACAGCTTTAATATTAGTAGTACTTTGTGTTACATGTATAACAAATTACTGA 1584 0.4527 MGKTEEEQPLPSSVASGDTEQNVEVNCGCRCSKIRKFIGLRCIFVLLLSVALFLSALFWLPPFLRYADQKYLGSDSKYKGHDIVASFIVKKPVSLLQDYISQLVDDIFDEILVPSTKVVILSLDPLAGSNMTKVEFAVDPDNKYSGMSSASASLIRSSFESLIAGQTVLRLTSSLFGNPFSFEVLKFKGGITIIPRQHAFLLQRPQTLFNFTLNFSIREIQSNFNQLTNELESGLHLASYENLYVILSNSEGSTVAAPTIVQSSILFAVGNGDIPSRERLKQLAKTITGSHSRNLGLNNTEFGRVKQVRLSSILQHSLNGSDGSGTSWSPAPVPLPHSPLHHHHHHHHHHHHHHHHHHHHPHPHHNAHLVPATSPTPAPEIGKHATPPGIGSPAPAKNVPPEGRSSRAEPPVCQFGHRKRSSQNAGKHPHLTPAAAPNIAAHYPVASPKKQVEPPGLVSRSVPVSSPLPNVAFAHAEPPPKTEPARERSSTHSHEPSPSPSSGGTRVTEKWTALILVVLCVTCITNY 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0776 527 MobiDBLite consensus disorder prediction 316 433 - -
Lele05g0776 527 MobiDBLite consensus disorder prediction 338 366 - -
Lele05g0776 527 MobiDBLite consensus disorder prediction 469 506 - -
Lele05g0776 527 PANTHER F20B24.21 1 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0776 Lele-ChrLele05 4590817 4594915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0776 1 314 C3H Transcription Factor Family AT3G10810 54.259 1.83e-92 289
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0776 05 4590817 4594915 Lele05g0776 05 4590817 4594915 ECH
Lele05g0776 05 4590817 4594915 Lele07g0810 07 4662834 4666892 hybridization
Lele05g0776 05 4590817 4594915 Lele08g0616 08 3743560 3746883 hybridization