Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0772 ATGGCATCTGATCCATGGGTTAGACAATATAATGAAGCATCAAAACTAGCAGCAGAAGTCAAGGGAATGATTTCTACTAAGAGTGGACTTCCCCCTTCTGGACCTGAAACACAGCGTCATTTATCAGCAGCCCGGAGAAAAGTAACCATACTAAGGACTAAAGTTGAAATTCTGCAGTCGCTTCTCCCAAAGCTGCCTGGCAAGCAACAAATAACAGGAAAAGAAATGAATCGTCGCCAAGATTTACTTGCTAATATAAGCTCCAAAGCAAATGAGATGGCTGCTACCCTTAACATGTCTGGTCTTGCTAATAGAGATAGCTTGCTAGGCCATGATAACAAGTCTGAAGAAGTCATGAAGAAAGCAGCTAGCTTGGACAACCAAGGCCTTGCTGGTTTTCAACGACAAATTATTATAGATCAAGATCTTGAAAATTTGGAAGAGACAGTTGCAAGTACCAAACACATTGCATTGGCAGTTAACGAGGAACTTAGCCTACATACTAGGCTTCTGGATGGCTTGGATGAGCATTTGGACACAACCAATTCCCGCCTACAGGTCCGGCCCTCAGTCCTTCACAGTTTACGTATGCTCTTTAATGAAGATGAGAAGTTAATTCAAAGGAATAATGATCAAGATGTAACATTTGATAAAATCTTGAGCTATTGCAATGATGTTCATGCTAGACTTGTTGTTTTCCTTGAAGCAGATGGCGCAAAGGAGGTTGGTCGTGTTGAGCAGGGGCACTAA 750 0.42 MASDPWVRQYNEASKLAAEVKGMISTKSGLPPSGPETQRHLSAARRKVTILRTKVEILQSLLPKLPGKQQITGKEMNRRQDLLANISSKANEMAATLNMSGLANRDSLLGHDNKSEEVMKKAASLDNQGLAGFQRQIIIDQDLENLEETVASTKHIALAVNEELSLHTRLLDGLDEHLDTTNSRLQVRPSVLHSLRMLFNEDEKLIQRNNDQDVTFDKILSYCNDVHARLVVFLEADGAKEVGRVEQGH 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0772 249 SUPERFAMILY SNARE fusion complex 139 187 - -
Lele05g0772 249 PANTHER SYNTAXIN 27 186 IPR045242 -
Lele05g0772 249 CDD SNARE_Qc 140 186 - -
Lele05g0772 249 Gene3D - 140 196 - -
Lele05g0772 249 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 140 195 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0772 Lele-ChrLele05 4546986 4549171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0772 2 186 SNARE and Associated Proteins AT1G79590 55.615 4.76e-71 217