Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0767 ATGGAACAAGAGCCGCTTCTGCCGAGTGAGGATCTTCGCCGCACTCGTGGTCGTGGGAGTAACCCCATGCTCCGCGCTTCCACCTTACGCGCCACTTTCACCCTCCCCTTGACTCGCTACACCACCCGTCTGATCGCGGCGGAGCACCACCGGATTTTATTCGGTGATTGTACGGAGAACCCATCCGAGGACGACGATGACCGACCGCTTGAGGATGGCAGTTGCGCCTATTCGATGCCCATTTTAGTTCTGGACCTTGTATGGAACCTGTCCTTCGTACTGGTCACTGCTGGTGTACTTCTTTCCACATTTACCGAGCATCCGTCCACCCCTTTGAGGCTTTGGCTCTGTGGGTATGCCTTTGAGTGTATGCTGCATATGGTTTTTGTGTGTTTCGAGTATTGGCGGAGGACTCGAGATTTTTACGGTCCTGAGCTTGGGCCTTCGCTTTCCCAGAGTTGGAACAGCAATGTGAAGAAGTTAGAGTCCATGAACACACTGGTGTCATCTATTTGGTGGGTCCTTGGGTTTTATTGGATTGTGGTGGGTGGCCAGCAACTTTTGCAAGACTGTCCTCGTATCTACTGGTTAACAGTGGTCTTTCTAGCCTTTGATGTGTTTTTTATTATCTTTTGCGTTGGGATGGTATGTATAGTTTTCTTTGCTCTCTTCTTTTTCATCCCGATAGTAGCTTTAGCTTATGCTATGCGAATCAGAGAAGGGGCATCAGAAGAGGATATCAGGTCTCTTCCTAAGTATAAGTTTAGTCAGTCAAATTCATTGGTGATGGTTGACGACAGTAATAAGCAAGTTTCTAAAGCAAGAATGAGTGCAAGCAATAGCAACCTTGTCAGTGAATTATATCTCGACCCAGATGATTCTGAATGCTGCATCTGCCTTTCTTCATACGTTGAAGGGGCAGAACTTTATCGCCTTCCCTGCGCACACCATTTTCATTGTGGATGCATCAGCAGATGGCTTCGGACAAAAGCAACCTGCCCTCTCTGCAAATTTAATATTCTTAGAAGTGATACATTGGTTTGA 1044 0.4732 MEQEPLLPSEDLRRTRGRGSNPMLRASTLRATFTLPLTRYTTRLIAAEHHRILFGDCTENPSEDDDDRPLEDGSCAYSMPILVLDLVWNLSFVLVTAGVLLSTFTEHPSTPLRLWLCGYAFECMLHMVFVCFEYWRRTRDFYGPELGPSLSQSWNSNVKKLESMNTLVSSIWWVLGFYWIVVGGQQLLQDCPRIYWLTVVFLAFDVFFIIFCVGMVCIVFFALFFFIPIVALAYAMRIREGASEEDIRSLPKYKFSQSNSLVMVDDSNKQVSKARMSASNSNLVSELYLDPDDSECCICLSSYVEGAELYRLPCAHHFHCGCISRWLRTKATCPLCKFNILRSDTLV 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0767 347 ProSiteProfiles Zinc finger RING-type profile. 296 337 IPR001841 -
Lele05g0767 347 PANTHER TARGET OF ERK KINASE MPK-1 71 341 - -
Lele05g0767 347 MobiDBLite consensus disorder prediction 1 18 - -
Lele05g0767 347 MobiDBLite consensus disorder prediction 1 21 - -
Lele05g0767 347 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 268 343 IPR013083 -
Lele05g0767 347 SUPERFAMILY RING/U-box 288 342 - -
Lele05g0767 347 SMART ring_2 296 336 IPR001841 -
Lele05g0767 347 Pfam Ring finger domain 295 337 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0767 Lele-ChrLele05 4513259 4516568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0767 76 344 C3H Transcription Factor Family AT1G68070 46.263 9.17e-87 263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0767 05 4513259 4516568 Lele07g0800 07 4588612 4592224 hybridization
Lele05g0767 05 4513259 4516568 Lele08g0606 08 3662674 3666040 hybridization