Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0724 ATGGAAGATCAAGGTGAGGGGCAACAAAAGGAGACCAATACTCGGAGCGAGCCGGTGAGGTCAAGGTGGACTCCGAAGCCTGAGCAAATCCTCATCCTTGAGTCCATCTTCAACAGTGGCATGGTTAATCCCCCCAAGGAGGAAACCATCCGCATCAGAAAGCTCCTCGAGAAGTTCGGCTCCGTCGGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCCAGATCCCGCCGCCGCCAGCGCCAGATGCAGGCCTCCCTCGACCAGCGAAACCAGCTTGAGCCTCAACTTGCTGCTGCCGCCGGTGCAATTCCTTATGATCATCATCAACCTCTCACCAACTCCTCTAGTACTTCTGATCCCCTTCCTCCTGTTACTACCATGCCTTTTGCCGCCACTTCTCCCTCCCTCCTTGATCTCTCCGGTTCGTCTTCTTCCTCTTCTTCTGGCATGCTTGCCGGCCAAGAAGCCCTTGACGGTCTTTTCTCGGTGGCTTCTCAAATGGGTTTCCCGGAATTTGATCACAGTTCCGCTGCTTCTTCAGCTCTATACCCTCCCCCACCTCATGCTTCCACCTTCAACTATCATTCTGGACTGATCACAGTGTTTATCAATGGAGTAGCAACAGAAGTTCCAAGGGGAGCATTGGACATAAAAACAATGTTTGGGCAAGACGTAGTGTTAGTTCATTCCTCCGGATTGCCACTTCCAACCAATGAGTTTGGTTTCCTGATGCAGAGCTTGCAGCATGGTGAAAGCTACTTTCTGTCTGCAGAAGTCCATGTCGACATCTAA 801 0.5231 MEDQGEGQQKETNTRSEPVRSRWTPKPEQILILESIFNSGMVNPPKEETIRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQMQASLDQRNQLEPQLAAAAGAIPYDHHQPLTNSSSTSDPLPPVTTMPFAATSPSLLDLSGSSSSSSSGMLAGQEALDGLFSVASQMGFPEFDHSSAASSALYPPPPHASTFNYHSGLITVFINGVATEVPRGALDIKTMFGQDVVLVHSSGLPLPTNEFGFLMQSLQHGESYFLSAEVHVDI 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0724 266 SUPERFAMILY Homeodomain-like 16 87 IPR009057 -
Lele05g0724 266 MobiDBLite consensus disorder prediction 111 130 - -
Lele05g0724 266 MobiDBLite consensus disorder prediction 1 24 - -
Lele05g0724 266 SMART HOX_1 18 85 IPR001356 GO:0003677
Lele05g0724 266 MobiDBLite consensus disorder prediction 1 17 - -
Lele05g0724 266 PANTHER WUSCHEL-RELATED HOMEOBOX 11 6 259 IPR044558 GO:0003700|GO:0048830
Lele05g0724 266 MobiDBLite consensus disorder prediction 109 130 - -
Lele05g0724 266 FunFam WUSCHEL-related homeobox 11 20 87 - -
Lele05g0724 266 Pfam Homeodomain 20 80 IPR001356 GO:0003677
Lele05g0724 266 Gene3D - 18 88 - -
Lele05g0724 266 ProSiteProfiles 'Homeobox' domain profile. 16 81 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0724 Lele-ChrLele05 4265969 4267735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0724 14 258 Wox Gene Family AT3G03660 52.713 1.25e-69 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele05g0724 Homeodomain 2.7e-13 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0724 05 4265969 4267735 Lele05g0724 05 4265969 4267735 ECH
Lele05g0724 05 4265969 4267735 Lele07g0762 07 4336255 4338017 hybridization
Lele05g0724 05 4265969 4267735 Lele08g0567 08 3427426 3428989 hybridization