Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0710 ATGTTGATGATACGCCATACGCTTTCTTCACCTACACTCCTTTTTGTAATTCTCCCTTCTGATTCACAATTTCTTCGTCAATCTTGGGGTTCGAATTTTGCTGCCACCCGTGACTGGCTTGGTAAGCGTGCTATGGAATCGGTGAGTTTAGTTGATGAAGAGGGTCAGAGTGTATCGGGATGTGACTGTGACCCTTGTGGGGATGTTGGGGATGAAGATGACAGGTGTCCTTGTTCGAGCTTGGCTGGGTTGGATGTGGCTAACGAGTGCGGACCAAGTTGTAAGTGCGGGTTGCAGTGTGGGAATCGGTTGAGTCAGAAGGGGATTTCAGTTCGGTTGAAAATCGTGAGGGATAGGAGGAAAGGATGGGGCTTGTACGCTGACCAATTGATACAGAAAGGGCAGTTCGTATGTGAATATGCAGGCGAACTCTTGACAACCAAGGAAGCGAGGAGGAGAAATCGGTGTTATGATGAGCTTTCATCGCAAGGTCAGTTTTCTTCTGCTCTTTTGGTAGTGAGGGAGCATCTGCCATCTGGAAGGGCTTGTTTGAGGTTGAACATTGATGCCACGAGAATAGGAAATGTTGCACGGTTCATTAATCATTCTTGTGATGGGGGATTGAGTATAAAGCCTAACAAGGATAGCATTCCTGATCTTTTGTCGTTTTGGTATGCTATGACAAGTGATGAATTCTCAGCGGGATACATGAACCTGTGTGGCTTACAGTGA 732 0.4658 MLMIRHTLSSPTLLFVILPSDSQFLRQSWGSNFAATRDWLGKRAMESVSLVDEEGQSVSGCDCDPCGDVGDEDDRCPCSSLAGLDVANECGPSCKCGLQCGNRLSQKGISVRLKIVRDRRKGWGLYADQLIQKGQFVCEYAGELLTTKEARRRNRCYDELSSQGQFSSALLVVREHLPSGRACLRLNIDATRIGNVARFINHSCDGGLSIKPNKDSIPDLLSFWYAMTSDEFSAGYMNLCGLQ 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0710 243 Pfam SET domain 122 206 IPR001214 GO:0005515
Lele05g0710 243 Gene3D SET domain 31 221 IPR046341 -
Lele05g0710 243 ProSiteProfiles SET domain profile. 111 243 IPR001214 GO:0005515
Lele05g0710 243 SMART set_7 111 232 IPR001214 GO:0005515
Lele05g0710 243 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 45 211 - -
Lele05g0710 243 SUPERFAMILY SET domain 55 210 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0710 Lele-ChrLele05 4183153 4184887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0710 89 208 C2H2 Transcription Factor Family AT2G23740 42.276 7.07e-20 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele05g0710 SET 1.1e-09 No_clan