Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0692 ATGGATCGATTCCATGTCACGTTGCAGGTGCATTCGAAGGCATGCCTTTGCCTTTGGGATTCATTTGATATCCCTCGTGAGCAAGGTAATGGTGGTGGTGGAGATATTGAGCTAGGGGCAAATGCAATGAATTCAGCAGATACGGGCTTGGAAAACTTCTTCAAAAAGGTTCAGGAGCTTGATAAACAATATGCAAAGCTGGATAAGCTTCTAAAAAAGCTTCAGGATGCCCATGAGGAGTCCAAAGCTGTAACCAAGGCTCCTGCCATGAAAACTATTAAGCAGAGAATGGAGAAAGATGTTGATGAGGTTAAGAAAATTGCCCATCATATCAAGACGAAAATTGAAGAACTTGACAAAGAGAATTTGGCAAATAGGCAGAAGCCTGGGTGCGGAAAAGGATCAGGAGTTGACCGGTCTAGAACAGCAACAACTACTGCCTTGAGAAAGAAGCTGAAGGACAAGATGGCTGAATTTCAGGTCCTGCGGGAAGCCATCCATCAAGAATATCGTGAGGTTGTTGAGAGACGGGTCTTTACAGTAACTGGCACGAGAGCTGATGAGGAGACAATTGATAGATTAATTGAGACAGGAGACAGTGAGCAAATTTTCCAGAAGGCTATTCAGGAACAAGGAAGAGGCCAGATAATAGATACCCTGGCAGAAATTCAAGAACGGCACGAAGCTGTTAGAGATGTTGAGAGGAAACTTCTTGAATTACAACAGATATTCATGGACATAGCAGTGCTAGTTGATGCACAGGGGGATATGCTGGACAATATAGAATCACAGGTCTCAACTGCAGTAGATCACGTGCAGCAAGGCAACACTGCCCTCCAGAAAGCCAAAAGCCTTCAGAAGAATTCTAGAAAATGGATGTGCATTGCAATCATTATACTCCTTATTGTTGTCATAATCATTGTCGTTGCCGTCATCAAGCCATGGGTTAAGAAGGGTGCTTAG 963 0.4372 MDRFHVTLQVHSKACLCLWDSFDIPREQGNGGGGDIELGANAMNSADTGLENFFKKVQELDKQYAKLDKLLKKLQDAHEESKAVTKAPAMKTIKQRMEKDVDEVKKIAHHIKTKIEELDKENLANRQKPGCGKGSGVDRSRTATTTALRKKLKDKMAEFQVLREAIHQEYREVVERRVFTVTGTRADEETIDRLIETGDSEQIFQKAIQEQGRGQIIDTLAEIQERHEAVRDVERKLLELQQIFMDIAVLVDAQGDMLDNIESQVSTAVDHVQQGNTALQKAKSLQKNSRKWMCIAIIILLIVVIIIVVAVIKPWVKKGA 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0692 320 CDD SynN 50 207 IPR006011 GO:0016020
Lele05g0692 320 ProSitePatterns Syntaxin / epimorphin family signature. 226 265 IPR006012 GO:0005484|GO:0006886|GO:0016020
Lele05g0692 320 Coils Coil 50 87 - -
Lele05g0692 320 Pfam SNARE domain 256 308 IPR000727 -
Lele05g0692 320 Pfam Syntaxin 52 255 IPR006011 GO:0016020
Lele05g0692 320 CDD SNARE_syntaxin1-like 219 281 - -
Lele05g0692 320 Gene3D - 46 174 - -
Lele05g0692 320 FunFam Syntaxin 132 213 313 - -
Lele05g0692 320 FunFam Syntaxin 132 45 174 - -
Lele05g0692 320 Gene3D - 213 313 - -
Lele05g0692 320 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 220 282 IPR000727 -
Lele05g0692 320 SMART tSNARE_6 215 282 IPR000727 -
Lele05g0692 320 PANTHER SYNTAXIN 48 303 IPR045242 -
Lele05g0692 320 Coils Coil 101 121 - -
Lele05g0692 320 SUPERFAMILY t-snare proteins 48 275 IPR010989 GO:0016020|GO:0016192
Lele05g0692 320 SMART SynN_4 45 171 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0692 Lele-ChrLele05 4071776 4076723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0692 18 320 SNARE and Associated Proteins AT3G03800 71.617 1.08e-149 421