Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0690 ATGCTCTCAGCTTCTTCATCTACTAATTTCTTCTTAATTTTTAGGGTTTTACTGAATCCTCTTGTTCGCATCTTTGTGTTTAGGTGGTCTCTGATAGCTGGAAGGATACCTGGAAGGACCGATAACGAGATTAAGAACTACTGGAATACCCATCTCAGCAAGAAGCTCATAAGTCAGGGAATCGACCCTAGAACTCACAAGCCCTTAATCACTTTCGACAATAATTCCAAATCTCAACAAGCATATCATGAATCAAATACAAGCACATGCAGGAATCCTCAATCATCTGCACGAGAGATTGGTAATCATCAGTCAAATGCTATCCAAAACAACAGTTCTGTCCCTGTTGGGAATAATTGGGGAACAAGTAGCGACAAAGTGACGAGGCTCGAAAATGGGGTTGAGGTTGAAGAACAGATCGGGAAGATTATGGGTGAGGAAGATGCACTATCTTCGTTTCTGGAATCTTTGATCAACGACAACGAAGTACTTGGGAATCAACAGACGGAGGCTGTCGGCCACCACGTGTTTCCTGTTTCACCGCTACAACATCCAGTGATGGCTCCTTCTTCTTCCCAGCAATTTTTCGATCTTTCCTTTTGGGAAGCTGAATTCCAGAGTTTCGGAAAAGATCAACAGTATGGTGGCCCCTTCAAGTAA 660 0.4303 MLSASSSTNFFLIFRVLLNPLVRIFVFRWSLIAGRIPGRTDNEIKNYWNTHLSKKLISQGIDPRTHKPLITFDNNSKSQQAYHESNTSTCRNPQSSAREIGNHQSNAIQNNSSVPVGNNWGTSSDKVTRLENGVEVEEQIGKIMGEEDALSSFLESLINDNEVLGNQQTEAVGHHVFPVSPLQHPVMAPSSSQQFFDLSFWEAEFQSFGKDQQYGGPFK 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0690 219 ProSiteProfiles Myb-like domain profile. 28 52 IPR001005 -
Lele05g0690 219 Gene3D - 15 96 - -
Lele05g0690 219 CDD SANT 28 52 IPR001005 -
Lele05g0690 219 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 28 142 - -
Lele05g0690 219 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 56 IPR017930 -
Lele05g0690 219 SUPERFAMILY Homeodomain-like 21 62 IPR009057 -
Lele05g0690 219 Pfam Myb-like DNA-binding domain 28 52 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0690 Lele-ChrLele05 4066679 4067338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0690 17 183 MYB Transcription Factor Family AT3G13540 42.012 2.68e-23 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele05g0690 Myb_DNA-binding 5.5e-06 CL0123