Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0674 ATGGAGGGTGGTGGGCGATGGTGCAACACGTGCTCTAACATGGTGAATCCAATGAGGGAAGGAGAGAACAACAAATGCCCAGTTTGTGGGTCAGAATTTGCAGAGGCAACAATGGAGACCCTGAGATCACCGGACCAAAACGAAGGAAGCGATTTGATGAGATCGGCCTCTGTGTTCTCTCTTTACGAGCCAATATTACTGGGCTTGATGAGTGCTCTCAGACCAGCTCTAGCAACCATCAGCAACAACAACAACAACAATGGTGGTTCGAGTTCGAGTTCAAGTTCAAGGGAGGAGGAAGACGGCGACGAGCAAGATCAGATAGAAGAGCACGGTGACCTTGTGGTGAGAAGAAGGAGAAGAACATCGTCCACTTCTCTCATGCTTGTCTTTCGTCGTCGCCACGATAGGATGGCGACGCAGCCGCAATCTGATCAGAATAATACTAACACAGAAAACGATCATAGAAACAACAATAACGGTCGCGATAATAATTACAACAACGTGAATCTCAACGTGGTTGTCATTGATCCTTTCAACGAAGAGGCCTTGATTCTGAGAGGTCCTTCACGGGCTAGAAATAGTAATCCGTTAATCGAGAATCCGATGGGGTCTCTGGGTGACTTTCTGGAGGGACCTGGGTTTGGGTTATTACTGCAACATTTGACACAGAATAACGAGCCTAATAGATACGTGAATAATGTGAACCCGCCGGCGCAGAAGGCGGCGATAGAAGCGATGCCGACGGTGAAGACGGAGGAGAACATGCAGTGCATAATATGTTTGGAGGATGCAGAGGTTGGGAGTGAAGTGAAGGAGATGCCGTGTGGGCATAAGTTTCACAGTGACTGCATTATCTCGTGGCTGAAACTTCGGAGTTCTTGCCCAGTTTGTAGGTTTCAGTTGCCGTCCGAGGTTACCAAGTTCGAAGCCAACGGTGGACGTCGGAATGAAGGCTATCCGAGTAATGATCAGGTGGTGGATAGAGAACAGCGAATGAGCTTTGGAAGAAGGAATTGGCTCTCCATATTGCAGCCATTTGATTACTTTCTTCCTTCTCCCTGA 1065 0.4817 MEGGGRWCNTCSNMVNPMREGENNKCPVCGSEFAEATMETLRSPDQNEGSDLMRSASVFSLYEPILLGLMSALRPALATISNNNNNNGGSSSSSSSREEEDGDEQDQIEEHGDLVVRRRRRTSSTSLMLVFRRRHDRMATQPQSDQNNTNTENDHRNNNNGRDNNYNNVNLNVVVIDPFNEEALILRGPSRARNSNPLIENPMGSLGDFLEGPGFGLLLQHLTQNNEPNRYVNNVNPPAQKAAIEAMPTVKTEENMQCIICLEDAEVGSEVKEMPCGHKFHSDCIISWLKLRSSCPVCRFQLPSEVTKFEANGGRRNEGYPSNDQVVDREQRMSFGRRNWLSILQPFDYFLPSP 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0674 354 MobiDBLite consensus disorder prediction 141 166 - -
Lele05g0674 354 MobiDBLite consensus disorder prediction 80 95 - -
Lele05g0674 354 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 111 303 - -
Lele05g0674 354 ProSiteProfiles Zinc finger RING-type profile. 258 299 IPR001841 -
Lele05g0674 354 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 225 305 IPR013083 -
Lele05g0674 354 FunFam E3 ubiquitin-protein ligase RNF181 227 305 - -
Lele05g0674 354 SUPERFAMILY RING/U-box 246 304 - -
Lele05g0674 354 SMART ring_2 258 298 IPR001841 -
Lele05g0674 354 MobiDBLite consensus disorder prediction 80 166 - -
Lele05g0674 354 Pfam Ring finger domain 257 299 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0674 Lele-ChrLele05 3965425 3966489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0674 156 319 C3H Transcription Factor Family AT1G26800 32.121 2.33e-24 97.1