Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0648 ATGGTGTTCGCACTCCTGCAATTTCAGGTGTACTTGTCTTGCTTGCTTGTGTCATCTTGGACCCGTGTATTGGCCTGTCTTTGTATTGCAACCCTTGCTGCCATTGTTGGTAGTCAAGCTGTTATTACGGCCATTTTCTCCATCATCAAGCAGTGTCACGCCCTTGGATGCTTCCCCCGAGTCAAAGTTGACACAACCTTAATTGGAAATGCTTATGGACTTGCTTGTATGACAGTGATGTTTGTGACAACATTTCTGATGGCTCTTGTCATCATCTTAGTCTGGCAAAAACGTGTTCTGCTTGCCACCATATTTCTTTTATTTTTTTGGGTAATAGAGGCTGTATATCTATCAGCAGCATTCACAGAGGTGCCTCAGGGTGGATGGTCTTCTCTTGTCCTGTCATTCCCCTTCATGATTGCCATGTATATGAAAGCAGTTGAACCACAATTCTCAAGCCCTGAAAGTTCTTCACTTGATGGAAGGATGGCTGTAATAAACACCAGAAGCTTAGAATCAACTTCCACATTAATAGTGTCTCAGCATGAAGATGTTGATGTGGACGACCACTCCATCCCCAGCAGCAAATCAACTACCCTGAGAAGTTTGCAATCCATTTATGAAGATGATAACAAACAAACCAGGAGGCGTCAACAAGCAGATGATGAGCAGCTGCCATACTATGATAATTCATCACAGGCTGATGCCTCTCCACCACGGAAGAAGCTTTTGGACAATCATAGGAAATGTAGTACTGTTTGGCGCTTGCATGGTGATAGAGGATGGTGTGCTCACACCAGCAATGTCGGTTCTAGCGTCAATATCAGGACTGCGAGTTGTACAGAAAACGTTGACGCAAGGAGTGTATTGCTCGTCTGTATCATATTGGTCGGTCTTTTTGCTCTCCAACATCACGGCACCTACAAAGTAGCATTTATGTTTGCCCCAGTGCTAATAATCTGGCTTGCATCCATTTTCTCTGTTGGGCTGTATAATACGATATTTTGGAATCCAAAAATAGTGTATGCGGTCTCCCCACATTACATCTTCAAATTCTTCAGAGAGACTGGTTTCGATGTTTGGAATTCTCTTGGAGGGATTCTCCTTTGTAGTGCTGGGTTTATACCTATCAGCCGTGCTCATGAAAGTTCCTCAGGGAGGGTGGGTTCCTCTTGGCCTATCCTGCTTCTAGGCTTAGGCCCTACGCTTGGAATTGTTCGTGTCCCAGGAATAGGCCTCATCTACTCAGAACTGGCAACAGGAGTTCCCGCCATATTTTCTCACTTCGTCAGCAACCTTCCTGCATTTCATAAGGTGTTGGTATTTGTTTGTGCGAAATCAGTTCCTGTTCCACATGTCTCTCCCAAAGGGCGCTTTCTTATCGTGCGAGTCTGCCCCAGACCATATCGTATGTATAGGTGCACAGTTATATATGGGTATAAGGACATTCGAAACAATGATGGAGACTTCGAGACCCTGCTTGTACAGAGTATTGCAGAGTTTATCATAACGGAAGCAATGAAATCACAGTTCATAAATGATGGGAATTCGGATATAGTTTGTTCGAGTTGCATTAGCTCACAATCAAGTTCAAGCTTAAAATCGTTTGTGCCCGAGGATGTTGGTCTGGACAACATTTCTGGCGGACCTTTAAGCCAGCAGAGTTTCCAATCTATGATTGAGGAGGATCAAAGGCTAGAACTTGTGGCGGGAAGCCAAGTGAAGTTTCAGCTGCCTCACAACAGGTATATGGATTCTGAAGTGAAGGAGGAGCTTTCGGATTTGATGGAAGCAAAGGGATCTGGGGTTACGTATGTAATGGGACACACCGAAGTGAAAGCAAGGAGGTCGTTGTGGTTGTTGAAAAAGCTGGGGATTGATTTTGGCTATTCATTCCTTCGCAGGAATTGCAGGGATCCGGCCGTTGCCCTTAACATTCCTCACGCCCTTAGTTACTTTCTGAGTCAAACACTGGCCACAACTTCTCTGCTTCGCGGTGACTGTTTTACCCGCTTTTTCTATGCTTTTGTTCATGGTTTTCACTTGAAGTCGATTCGACTGGAGATATTTTACTATGAATCCAGGATGAGTTTTCAAGATCTCCAGGGCGGGCCCAGGCGACCCACTTCTCGAACTCAATCGCCGTCGCAGGCGTTGGCTGCCGGAATTTTCCAGATCAATACAGGCGTTGCCACTTTCCGACGACTCGTTGATGGCATTGGAACTGTCAAAGATACCGTCGCTCACCGCCAGAAGCTGTATGTTTCTTTCTACTTGCGGAAACTAACTATCCTTTTCTTTTATGCGGTTTTTCTGTTGCGATTTTGTTTGTTACTTAACCGCTGTCTTTGGATTTGTGTACTATTTGGTAGGCACGATACGAGGCAGCGGATATTGCAGCTGGTGAAGGATACTTCTGCAAAGCTCAAAGCCTTGAGCGATTCCGATCTTGCTGCCCATGCCGATTCTGGTAGGAAAATTGAAGATGCTAAGCTGGCGAGAGATTTCCAGACCACATTACAAGAATTCCAGAGAGTGCAACAGCTTGCTTCTGAGCGCGAATCTACCTACCTTCCTGCTGGTCCTGCTTCTTTACCAGCGAGCTCTGGCTCTGTTGGAGAATCAACTGGCATAGGTCAGGAAAGCCAACCTTTTATCAGGGAACAAAAGAGGCAGGAGATACTCTTATTAGATAATGAAATTGCATTCAATGAGTCCATGATTGAAGAAAGAGAACAGGGTATCAGGGAGGTAGAGGTGCAAATTGGACAAGTAAATGAAATATTCAAGGACCTAGCTGTTCTGGTTCATGAGCAGGGGGTGGTTATTGATGATATTCAATCAAATATTGATACTTCTGCGGGTGCAACAACCCAAGCTACTACAGAGTTAGCCAAGGGTTCCAAAAGTATGAAATCTAAATCTTCATGGTGTTGCTGGGTGCTTACAATATTTGTCATAGTGGTGGTTATCGTGCTTATTGTTCTCATTATTTAA 2997 0.4468 MVFALLQFQVYLSCLLVSSWTRVLACLCIATLAAIVGSQAVITAIFSIIKQCHALGCFPRVKVDTTLIGNAYGLACMTVMFVTTFLMALVIILVWQKRVLLATIFLLFFWVIEAVYLSAAFTEVPQGGWSSLVLSFPFMIAMYMKAVEPQFSSPESSSLDGRMAVINTRSLESTSTLIVSQHEDVDVDDHSIPSSKSTTLRSLQSIYEDDNKQTRRRQQADDEQLPYYDNSSQADASPPRKKLLDNHRKCSTVWRLHGDRGWCAHTSNVGSSVNIRTASCTENVDARSVLLVCIILVGLFALQHHGTYKVAFMFAPVLIIWLASIFSVGLYNTIFWNPKIVYAVSPHYIFKFFRETGFDVWNSLGGILLCSAGFIPISRAHESSSGRVGSSWPILLLGLGPTLGIVRVPGIGLIYSELATGVPAIFSHFVSNLPAFHKVLVFVCAKSVPVPHVSPKGRFLIVRVCPRPYRMYRCTVIYGYKDIRNNDGDFETLLVQSIAEFIITEAMKSQFINDGNSDIVCSSCISSQSSSSLKSFVPEDVGLDNISGGPLSQQSFQSMIEEDQRLELVAGSQVKFQLPHNRYMDSEVKEELSDLMEAKGSGVTYVMGHTEVKARRSLWLLKKLGIDFGYSFLRRNCRDPAVALNIPHALSYFLSQTLATTSLLRGDCFTRFFYAFVHGFHLKSIRLEIFYYESRMSFQDLQGGPRRPTSRTQSPSQALAAGIFQINTGVATFRRLVDGIGTVKDTVAHRQKLYVSFYLRKLTILFFYAVFLLRFCLLLNRCLWICVLFGRHDTRQRILQLVKDTSAKLKALSDSDLAAHADSGRKIEDAKLARDFQTTLQEFQRVQQLASERESTYLPAGPASLPASSGSVGESTGIGQESQPFIREQKRQEILLLDNEIAFNESMIEEREQGIREVEVQIGQVNEIFKDLAVLVHEQGVVIDDIQSNIDTSAGATTQATTELAKGSKSMKSKSSWCCWVLTIFVIVVVIVLIVLII 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0648 998 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 64 144 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lele05g0648 998 CDD SNARE_Qa 908 964 - -
Lele05g0648 998 SMART tSNARE_6 900 967 IPR000727 -
Lele05g0648 998 MobiDBLite consensus disorder prediction 206 243 - -
Lele05g0648 998 Pfam Syntaxin-like protein 792 857 IPR006011 GO:0016020
Lele05g0648 998 MobiDBLite consensus disorder prediction 858 881 - -
Lele05g0648 998 Gene3D - 706 861 - -
Lele05g0648 998 Pfam SNARE domain 942 993 IPR000727 -
Lele05g0648 998 Gene3D - 900 998 - -
Lele05g0648 998 MobiDBLite consensus disorder prediction 208 223 - -
Lele05g0648 998 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 905 967 IPR000727 -
Lele05g0648 998 FunFam Syntaxin-22 like 898 998 - -
Lele05g0648 998 SUPERFAMILY t-snare proteins 792 960 IPR010989 GO:0016020|GO:0016192
Lele05g0648 998 Pfam K+ potassium transporter 282 373 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lele05g0648 998 Pfam K+ potassium transporter 66 148 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lele05g0648 998 Pfam K+ potassium transporter 406 482 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0648 Lele-ChrLele05 3821116 3832228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0648 696 985 SNARE and Associated Proteins AT5G46860 49.320 2.67e-80 260