Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0642 ATGCTTCAATCATGTCGGCTTCAATTTGATTTTAGCTTGGTTGGAACCGTCAAAGAGAATCAAGAGGGTCCCTTCTGTATTTGCTGGTTTACATGGCATTCTCTTGTATTACCATCAACCGGAACGTCAAAACTCAGTCTTGATCTGAAGGGGTTTGCTGTTGCTTTTGATCCGATTTATTACACTACAACTTTTTCCAGCATTATTGATTCTCTTTTTTCCATGTTTGGCTGTGGATTACTCTCTGCATGTGGTCTCATACTCAATGCAGGGTCTCTTGCAGCGATAGTAGGAGGAGCTGCAGGGGCCGTGGCATTGGTAGGGATAGTTATAGCACTCATATGCTTCTGCCTATCTCGCAGGAGGAGTGTCTCAAGGACTTCAGAGACAGGCTCCTCTGATCCTTCCCAAGTGGGAAGACATGGTGGGATTGAGTTGACTTTACGAGATACCAGGCGGTTTGAGATGGAAGAACTATCTCAGGCCACAAAGAATTTCAGTGACAAAAATGTGATCGGAGAAGGCAAGTTTGGGGAGGTTTACAAAGGCTTACTTCATGATGGTATACTTGTGGCCATCAAAAAGCGGCAGGGATTTCCGAGCCAGGAATTTGTTGATGAGGCTCGCTACCTCTCATCCATTCATCATCGGAATCTCGTAACTCTTTTGGGCTATTGCCAGGAACAAAATCTGCAGTTTCTTATATACGAATATGTGCCTAATGGGAGCGTCTCTAGTCACTTGTATGGTGCTGGTCAACAATTGAAAGAGAAGCTAGAATTCAAGCTTAGACTTTCAATAGCTCTAGGTGCAGCTACAGGTTTGGCTCATATTCATTCCTTGAGCCCCCGGTTGGTGCATAAGAATTTCAAAACAGCCAATGTTCTGGTGGATGAAAATTTCATCGCTAAGGTGGCAGATGCTGGACTGCGCAATTTCCTGGGAAGAGGTGATATTGCAGGCCCATCTTCTCAAGTTGCAGCAGATGAGATATTCCTTGCTCCCGAGGTTAGAGAGTTCAGACGATTTTCTGAAAAGAGTGATGTATACAGTTTTGGGGTATTTTTGCTCGAACTATTAAGTGGGAAGGAAGCAACAGAATCTCCAACTTCAGACTCTAATCATAATCTAGTTGAATGGGTGCAAGTTAATGAAGATCATCGCATTATGTCTAACATCATTGATCAGAGATTGGGGAGCAGTTTCACGGCGGAAGGTATGGAAGAGTTTATCTTGCTGGTAGCTCGATGTTTGAGTCCTTCAAGTGAGAGAAGACCTTCCATGAGTTATGTATTAATGGAACTTGAACGGATTCTTGACAAGGAAATGAACTTGACAACAATGATGGGCGAAGGCACCCCAACCGTGACCCTTGGTAGTCAGTTATTCAAAGCAACAAGTGATGATTGGGTTGGTGTGGTTATGCCTGTTTATGAGTTTCTGATGTTTTCTTATGCTCCACTTATTTGCATTCCATTAATGCTTGCTCTACTTGTGGGAGGAACTATGAAAGATCTTAAATTCGATCCAGCTTGA 1536 0.4336 MLQSCRLQFDFSLVGTVKENQEGPFCICWFTWHSLVLPSTGTSKLSLDLKGFAVAFDPIYYTTTFSSIIDSLFSMFGCGLLSACGLILNAGSLAAIVGGAAGAVALVGIVIALICFCLSRRRSVSRTSETGSSDPSQVGRHGGIELTLRDTRRFEMEELSQATKNFSDKNVIGEGKFGEVYKGLLHDGILVAIKKRQGFPSQEFVDEARYLSSIHHRNLVTLLGYCQEQNLQFLIYEYVPNGSVSSHLYGAGQQLKEKLEFKLRLSIALGAATGLAHIHSLSPRLVHKNFKTANVLVDENFIAKVADAGLRNFLGRGDIAGPSSQVAADEIFLAPEVREFRRFSEKSDVYSFGVFLLELLSGKEATESPTSDSNHNLVEWVQVNEDHRIMSNIIDQRLGSSFTAEGMEEFILLVARCLSPSSERRPSMSYVLMELERILDKEMNLTTMMGEGTPTVTLGSQLFKATSDDWVGVVMPVYEFLMFSYAPLICIPLMLALLVGGTMKDLKFDPA 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0642 511 Gene3D Phosphorylase Kinase; domain 1 138 238 - -
Lele05g0642 511 SUPERFAMILY Protein kinase-like (PK-like) 151 449 IPR011009 -
Lele05g0642 511 Pfam Protein tyrosine and serine/threonine kinase 169 434 IPR001245 GO:0004672|GO:0006468
Lele05g0642 511 Gene3D Transferase(Phosphotransferase) domain 1 239 453 - -
Lele05g0642 511 ProSiteProfiles Protein kinase domain profile. 166 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0642 511 FunFam Protein kinase superfamily protein 131 238 - -
Lele05g0642 511 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 102 444 - -
Lele05g0642 511 FunFam Protein kinase superfamily protein 239 452 - -
Lele05g0642 511 ProSitePatterns Protein kinases ATP-binding region signature. 172 195 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0642 Lele-ChrLele05 3781595 3785202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0642 88 451 Receptor kinase-like Gene Family AT5G56890 35.678 2.00e-61 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Lele05g0642 PK_Tyr_Ser-Thr 4.7e-40 CL0016