Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0631 ATGGGAGGGGAAGGCAAGTTGGGGGAGGCGGAATTGATGTTCCCAAGATGTGGAGAGAGAATATCCCAGCGCCGATGCTCTTGCTTTGCTGAATTGCTGGGTCGCTGTTATTTAATGGTTGGCCATTGCTGCGTAGACCGGAAGAGGGAGCAGCGCCAGAAAGCTTTTGGCAGCCAGAGATTGGGAGTGCGTGTCTCCGGCATTCCTTTGAACTCTCCGACGCACCCTCCCTTCCTCATTCATCGCTCTTCCTCCATGGCTCTCTCAGACTCCTCATGCCGCAACTCTTTGATCCCTACCTTCCTCTACTCCTCTCCTTCCTCCACCAAAACATTGCCTCTCCAGAAGATGCTCAACTCTTCCCCCGCCGCCGCCGCCGCCTCTTCTCCGGCTTCCAATCTGGAAGTCGGATCGCCCAGGCCCAACTTCATGATTCCGGCTCCAAGTGAGCCTGGCAAGATCCAGATGTACTCGCCTGCCTTCTATGCTGCTTGTACTGTTGGTGGAATTCTCAGCTGTGGTCTCACTCATATGGCGGTCACACCTCTTGACCTTGTCAAGTGTAATATGCAGATTGACCCTGCTAAGTACAAAAGCATATCATCTGGATTTGGAGTATTACTTAAGGAGCAGGGAGTAAGGGGTTTCTTCAGAGGCTGGGTGCCTACCTTGCTTGGTTACAGTGCTCAGGGTGCTTGCAAATTTGGATTTTATGAGTTCTTTAAGAAGTATTATTCTGATATTGCTGGTCCAGAGTATGCGGCCAAGTACAAGACCTTGATCTACCTTGCTGGTTCAGCATCAGCTGAGGTTATCGCTGATGTTGCACTTTGCCCCTTTGAGGCAGTAAAGGTTCGAGTTCAAACTCAGCCCGGTTTTGCTAGAGGTTTGGCTGATGGGTTGCCAAAATATGTTAGATCTGAAGGAGCAATGGGGCTATACAAGGGAATTGTTCCTCTGTGGGGACGCCAGATTCCATATACAATGATGAAGTTTGCTTCTTTTGAAACTATCGTTGAGCTGATCTACAAGCATGCCATCCCCACACCAAAGAATGAGTGCAGCAAACCTCTGCAGCTTGGTGTTAGTTTTGCTGGTGGATACGTTGCTGGTGTATTTTGTGCCATTGTATCTCATCCTGCTGATAACCTCGTCTCCTTCCTGAACAACGCCAAGGGAGCTACAGTTGGTGACGCGGTGAAGAAGCTTGGTGTGTGGGGTCTTTTCACCCGTGGACTCCCTCTTCGTATTGTTATGATCGGAACTCTCACTGGAGCTCAATGGGGAATATATGATGCTTTCAAAGTTTTTGTGGGGCTGCCAACCACTGGTGGTGCTGCTCCTGCTGCCGCTCCTGCCTCTCAGCTAGCCAAGGCTTAG 1380 0.5036 MGGEGKLGEAELMFPRCGERISQRRCSCFAELLGRCYLMVGHCCVDRKREQRQKAFGSQRLGVRVSGIPLNSPTHPPFLIHRSSSMALSDSSCRNSLIPTFLYSSPSSTKTLPLQKMLNSSPAAAAASSPASNLEVGSPRPNFMIPAPSEPGKIQMYSPAFYAACTVGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKYVRSEGAMGLYKGIVPLWGRQIPYTMMKFASFETIVELIYKHAIPTPKNECSKPLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGVWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGAAPAAAPASQLAKA 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0631 459 SUPERFAMILY Mitochondrial carrier 163 433 IPR023395 -
Lele05g0631 459 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 123 448 IPR044677 GO:0005315|GO:1990547
Lele05g0631 459 Pfam Mitochondrial carrier protein 261 345 IPR018108 -
Lele05g0631 459 Pfam Mitochondrial carrier protein 163 246 IPR018108 -
Lele05g0631 459 ProSiteProfiles Solute carrier (Solcar) repeat profile. 257 341 IPR018108 -
Lele05g0631 459 ProSiteProfiles Solute carrier (Solcar) repeat profile. 358 437 IPR018108 -
Lele05g0631 459 FunFam Phosphate carrier protein, mitochondrial 160 438 - -
Lele05g0631 459 ProSiteProfiles Solute carrier (Solcar) repeat profile. 160 244 IPR018108 -
Lele05g0631 459 Gene3D Mitochondrial carrier domain 161 438 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0631 Lele-ChrLele05 3720148 3724746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0631 91 459 Chloroplast and Mitochondria Gene Families AT5G14040 80.214 0.0 596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0631 05 3720148 3724746 Lele05g0631 05 3720148 3724746 ECH
Lele05g0631 05 3720148 3724746 Lele06g0447 06 2734206 2738602 ECH
Lele05g0631 05 3720148 3724746 Lele07g0661 07 3779463 3783941 hybridization
Lele05g0631 05 3720148 3724746 Lele08g0460 08 2806681 2811224 hybridization