Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0592 ATGGACTGGGACTGGAAAGAGTTGGCGTGGGATCCGTCTGGGTCGGAGCTATCAAATGGAGTGGCTTCGGTGGACTTGAGTCTTGGAGAGACTTCCGATTTCACACAAAGACCCCCCTCGTACACGCCTAAGGACTTACCAAGAGACTCGAAATCGGCATCATCGCCATGCGGTTCGTCAAAGAGGAGCCGTACGCTAAATGGATCGATGCACAGTGCTTCGTGCTTGGTGGATGGATGCGACTCCGACCTGAGTGATTGCAGAGAGTATCATCGGCGACACAGAGTGTGTGAGAAGCACTCCAAGACGCCCAATGTATTGGTAGGGGGAAAGCAGCAGCGATTCTGCCAGCAATGCAGCAGATTTCATTCTCTGGGGGAGTTTGATGGAGTTAAGAGGAGTTGCAGGAAACGTCTTGATGGACATAACAGGCGCAGAAGGAAGCCTCAGCCGCCTTCTCTTTTCATGGCTGCTGAGAAATTCCTGAGCGGCTACAAAGGACCAAGAATCCTTCATTTTGGTAGTCCTCAGACGTACAACTACCCGTTTGTGAGAAATATGTGGCCTGCCACTGCCAAAGCTGGAGCTGAACCAGTGATGATCAGTTATGACCAAAGCAGTCTGCTAAGTTCCTTTGCTAATGTGGAGTATCAGCAGGATAAGCAGCTTCCTCTCTTTGGATTAAACAGCTCTAAAGCAGGCCATGGCAATGAAGCAGTGTCTGGAATTCCCCTCAGCCAAACAAGTTCTGGTGCCGTTGCCCCATCAGGAAGTGCAAATGGTGGCCGGAAGCTCGCTTCTGATTGCAAACCTGGATCTTTTGATTCAAATTGTGCTCTCTATCTTCTGTCAACACTTCAGACACAAAGTCAAGAGTTAAGCTTGGTGCAGTCCTCCGTAAGCTGTCCAGGGCAATCTGACCCATTAGAAGATTTTCATTTGGATGCTGGGGACAAGTACTCATCATGCTCAGAAAGTCCACAAGAAAAGTCCACTAATCCATTATTGGATGTGGATGCCGACACAGCCAACCTTCATTGCGGCCATATGATGCACATGAGGCCTGAGGAAATTGTGGAAAATGGGGACTTGGCGACCTTTCCATTTTTCTGGGAGTAG 1119 0.4933 MDWDWKELAWDPSGSELSNGVASVDLSLGETSDFTQRPPSYTPKDLPRDSKSASSPCGSSKRSRTLNGSMHSASCLVDGCDSDLSDCREYHRRHRVCEKHSKTPNVLVGGKQQRFCQQCSRFHSLGEFDGVKRSCRKRLDGHNRRRRKPQPPSLFMAAEKFLSGYKGPRILHFGSPQTYNYPFVRNMWPATAKAGAEPVMISYDQSSLLSSFANVEYQQDKQLPLFGLNSSKAGHGNEAVSGIPLSQTSSGAVAPSGSANGGRKLASDCKPGSFDSNCALYLLSTLQTQSQELSLVQSSVSCPGQSDPLEDFHLDAGDKYSSCSESPQEKSTNPLLDVDADTANLHCGHMMHMRPEEIVENGDLATFPFFWE 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0592 372 Gene3D - 66 136 IPR036893 GO:0003677|GO:0005634
Lele05g0592 372 FunFam Squamosa promoter-binding-like protein 14 66 136 - -
Lele05g0592 372 MobiDBLite consensus disorder prediction 47 67 - -
Lele05g0592 372 Pfam SBP domain 75 148 IPR004333 GO:0003677
Lele05g0592 372 SUPERFAMILY SBT domain 74 154 IPR036893 GO:0003677|GO:0005634
Lele05g0592 372 MobiDBLite consensus disorder prediction 307 335 - -
Lele05g0592 372 MobiDBLite consensus disorder prediction 321 335 - -
Lele05g0592 372 MobiDBLite consensus disorder prediction 28 67 - -
Lele05g0592 372 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 29 307 IPR044817 GO:0003677
Lele05g0592 372 MobiDBLite consensus disorder prediction 242 256 - -
Lele05g0592 372 ProSiteProfiles Zinc finger SBP-type profile. 72 149 IPR004333 GO:0003677
Lele05g0592 372 MobiDBLite consensus disorder prediction 242 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0592 Lele-ChrLele05 3473109 3474901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0592 75 173 SBP-box Gene Family AT5G50670 67.677 1.93e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele05g0592 SBP 1e-30 No_clan