Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0578 ATGGCGGGAGAGGAGCCGCTGAAGCAAATCACGTCTCCATGCTCGTATTCTGCTTCTACTTCTCCTTCTCTTTCTCTTCCAGGGAAAAACGATGATCCGAACCAAAAATGCTGGAGGAAGCAAGCGGACGAGAATCCCAAGAGGCTTCACTCTCTTCTCTTTGGGGCCGATCATGCCATTCAGAAAGATGATTTTGAGTCGGCGTACATCCTCGGGCTTTGCCTCATCTCCTTTCTTGACTCTCGCTGCCACTACGATGTCGATGAAGCCTATATACTTCCAATTCGCCGTGAAGTCTTGGGGAAAATCGACCCCTCCGATCGCCAAGCGTTTGAACAAGCAAAAAATTCTCCAGGGTGTATTTTTGGCAAAACAGGAGATATTGACATTGGGAAAATTAAGAAGTCGAAGTACTTCCAAGCTCTTCTCAACGAGTCCAAAGAAAAGGTGGAGAATCGATTGGGTGATCATCTGGAGAAGCAAGACAAAGCAGGCAGCAAAATTCCAAAAGAATTCCTGTCACATGGTGGCCACAGTAAGGGTCATCCTGTCTCTTCTTTCTTGAAAACTGAAGGGGAAGAAAGAACTTGTGGAACTTTGGGGACAAAGCGTGTGCTGGAAACTAATAGCCCTCAAGCTAGTAACGTGAAGTCACCTACAAGCAATGGGGAAGCTAAGTCTGATACTTGTGGCAGTGGGTTTTTCACTGCCAGAGCTAAATTGGAAATGGAAACAAGGCAGAAACGAGAAGGGATTGGTTCACCCACTGCATCTGCCTCACAATATGATAACAATTCTTTTAATCGGGTATATGGTGGGAGATCATATGGTGTTTCACGAAGTGGAGTCCGTGTATATCACCAGAATAAGTTTGCAACACATATCAAAAGATTCCCATCTAATGGTGGTCGGATTACTCTTTTCCTTACATTACCTTACTGGGCCCCAGTATTCTGTAGGTCTTGTTATCTTACTGATCTGAACAAGGCTGAATACGCCCTTTTCTTTATATTGCAGATATCAAGGCTTTTTTCGTTGTTGGAAAGGCTATGTGGTCCTGATGGAGAGGTTCCTGAGAAACTGAGGAATATAGAACCTCGCGTTATTGAACATGTTAGCAATGAGGTTATGGATAGAGATCCTAATGACCGGTGGGATGACATTGGTAATACAGCGGGATTGGAGCACGCCAAGAAATGTGTCACTGAGATGGTCATATGGCCTCTGCTACGTCCTGATATATTTAAGGGATGCCGCTCTCCTGGGCGAGGTCTACTTTTATTTGGTCCCCCAGGAACTGGTAAAACAATGATAGGAAAAGCCATAGCAGGAGAGGCAAAGGCAACCTTTTACATATGGGCGAGTTCGTTGACAAGCAAGTGGATTGGAGAAGGTGAAAAACTAGTAAGAGCGGTCTTTGGAGTTGCCGGTTGTCGCCAGCCGGCTGTAATATTTGTCGATGAAATAGATTCTCTCCTATCTCAGCGTAAGTCTGAGGGTGAACATGAATCAAGTAGAAGGCTAAAGACGCAATTTCTCATTGAAATGGAAGATTTTGACCGTGGTAACGAGCAGGTTCTTCTTGTAGGGGCCACCAATCGTCCCCAAGAGCTTGATGAAGCAGCACGAAGGCGACTTACTAAAAGACTTTATATCCCCCTGCCATCCTCAGAGGCAAGAGCATGGATTGTACGTAACCTCCTAGAGAAGGACGGACTATTCAAGCTGTCAAAGGAAGAGATTGATACCATATGCAACAAAACGGAAGGATATTCGGGATCAGACATGAAAAATTTAGTGAAGGATGCTTCAATGGGTCCCCTAAGAGAGGCTTTAACGCGGGGCATAGAAATTAAAAAGTTGAACAAGGAAGATATGTGGCCAGTAGCTCTTCAGGACTTTATGGATTCCCTAAAGGAGGTGAGGCGATCTGTTTCCTCGAATGAACTTGGTGCATACGAAAAATGGAACGACCAATTTGGAAGCCTATCATCGGAGAAGCTCGAGTCATCTGTATGA 2019 0.4502 MAGEEPLKQITSPCSYSASTSPSLSLPGKNDDPNQKCWRKQADENPKRLHSLLFGADHAIQKDDFESAYILGLCLISFLDSRCHYDVDEAYILPIRREVLGKIDPSDRQAFEQAKNSPGCIFGKTGDIDIGKIKKSKYFQALLNESKEKVENRLGDHLEKQDKAGSKIPKEFLSHGGHSKGHPVSSFLKTEGEERTCGTLGTKRVLETNSPQASNVKSPTSNGEAKSDTCGSGFFTARAKLEMETRQKREGIGSPTASASQYDNNSFNRVYGGRSYGVSRSGVRVYHQNKFATHIKRFPSNGGRITLFLTLPYWAPVFCRSCYLTDLNKAEYALFFILQISRLFSLLERLCGPDGEVPEKLRNIEPRVIEHVSNEVMDRDPNDRWDDIGNTAGLEHAKKCVTEMVIWPLLRPDIFKGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKATFYIWASSLTSKWIGEGEKLVRAVFGVAGCRQPAVIFVDEIDSLLSQRKSEGEHESSRRLKTQFLIEMEDFDRGNEQVLLVGATNRPQELDEAARRRLTKRLYIPLPSSEARAWIVRNLLEKDGLFKLSKEEIDTICNKTEGYSGSDMKNLVKDASMGPLREALTRGIEIKKLNKEDMWPVALQDFMDSLKEVRRSVSSNELGAYEKWNDQFGSLSSEKLESSV 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0578 672 MobiDBLite consensus disorder prediction 10 30 - -
Lele05g0578 672 Pfam ATPase family associated with various cellular activities (AAA) 425 554 IPR003959 GO:0005524|GO:0016887
Lele05g0578 672 ProSitePatterns AAA-protein family signature. 526 545 IPR003960 GO:0005524|GO:0016887
Lele05g0578 672 CDD AAA 418 554 - -
Lele05g0578 672 FunFam Fidgetin like 1 555 641 - -
Lele05g0578 672 FunFam Fidgetin-like 1 381 565 - -
Lele05g0578 672 PANTHER AAA DOMAIN-CONTAINING 174 662 - -
Lele05g0578 672 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 390 660 IPR027417 -
Lele05g0578 672 Gene3D - 384 657 IPR027417 -
Lele05g0578 672 Gene3D - 555 641 - -
Lele05g0578 672 Pfam Vps4 C terminal oligomerisation domain 628 661 IPR015415 -
Lele05g0578 672 Pfam AAA+ lid domain 581 617 IPR041569 -
Lele05g0578 672 SMART AAA_5 421 556 IPR003593 -
Lele05g0578 672 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0578 Lele-ChrLele05 3395976 3400729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0578 359 663 Calmodulin-binding Proteins AT3G56690 32.372 1.53e-35 142