Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0574 ATGCCGGAGGGGACGACGCCGATCGCCTACGTGATGGAAGCAGTTTCAGGGCCTCATTTCTCCGGCCTACGCCTTGACGGCCTTAGTTCGTCTCTACCTTCTCCATATACGTCTCCTATACATCCTTTTGCTGCTTGCGCTCTTGGTTCCTCAACCGTAGCTCCTGATTCTCCTCATCAACAGCCTTTCGTAATTGGAGTTTCGGGAGGTACTGCTTCCGGTAAGACCACTGTATGTAACATGATTATCCAGCAGCTTCACGATCAACGAGTTGTGCTTGTCAATCAGGATTCGTTTTATCGTGGTTTGACGTCTTCAGAAATGGAACGTGTGCACGAGTACAATTTTGATCATCCCGACGCTTTTGACACCGAGCAGCTTGTAGATTGCATGCAAAAGCTCCTAGGCGGCCACAGCGTCCAAGTCCCAATTTATGACTTTAAGAAGCACCAGCGCTCTACTGATAGTTTTCGACAGGTCAATGCTTCTGATGTCATTATATTAGAGGGAATTCTTGTTTTCCATGACCAACGTGTACGTGATCTGATGAGCCTGAAAATTTTTGTTGATTCAGATGCGGATGTAAGACTTGCTCGTAGAATTAGACGCGATACAGTGGAAAGAGGTAGGGATGTAAGCTCTGTTCTCGAACAGTATGCAAAGTTTGTCAAGCCTTCTTTTGATGATTTTATTCATCCATCAAAGAAGTATGCTGATGTGATCATTCCACGAGGAAGTGAAAATCATGTTGCCATTGATCTGATTGTACAACATATCCAGACAAAACTTGGTCAACATGATCTGTGCAAGATATACTCTAATCTTTATGTTATTCAGTCAACATTCCAGATCCGAGGAATGCATACATTGATTCGTGATCGAGACATTTCAAAGCATGATTTTGCGTTTTACTCAGATAGACTTATACGGCTGGTTGTTGAGCATGGCCTTGGTCATTTGCCATTCACTGAAAAGCAAGTAGTTACTCCAACAGGATCTATCTATACTGGAGTTGACTTCTGCAAGAAACTCTGTGGTGTTTCAATTGTTCGAAGTGGTGAGAGCATGGAAAATGCACTACGTGCATGTTGCAAAGGTATTAAAATTGGCAAAATTCTGATTCACCGAGATGGAGACTTTGGAAAACAGCTAATATACGAGAAGCTTCCCCAGGACATTTCAGAACGTCATATTTTGCTTCTTGACCCTGTCCTTGCCACAGGTAATTCCGCAAGCAAAGCTATTGAGTTACTCATTCAGAAAGGAGTTCCGGAATCCCACATAATATTCCTGAATCTCATCTCTGCACCCGAGGGAATCCAATGTGTGTGTAGAAGGTTTCCGTCCTTGAAAATTGTAACATCTGAGATTGACGTTGGCCTAAACGAAGAGTTCCGAGTAATCCCTGGAATGGGCGAGTTTGGGGATCGCTACTTCGGTACCGATGATTGA 1452 0.4373 MPEGTTPIAYVMEAVSGPHFSGLRLDGLSSSLPSPYTSPIHPFAACALGSSTVAPDSPHQQPFVIGVSGGTASGKTTVCNMIIQQLHDQRVVLVNQDSFYRGLTSSEMERVHEYNFDHPDAFDTEQLVDCMQKLLGGHSVQVPIYDFKKHQRSTDSFRQVNASDVIILEGILVFHDQRVRDLMSLKIFVDSDADVRLARRIRRDTVERGRDVSSVLEQYAKFVKPSFDDFIHPSKKYADVIIPRGSENHVAIDLIVQHIQTKLGQHDLCKIYSNLYVIQSTFQIRGMHTLIRDRDISKHDFAFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSIYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDFGKQLIYEKLPQDISERHILLLDPVLATGNSASKAIELLIQKGVPESHIIFLNLISAPEGIQCVCRRFPSLKIVTSEIDVGLNEEFRVIPGMGEFGDRYFGTDD 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0574 483 Pfam Phosphoribulokinase / Uridine kinase family 64 250 IPR006083 GO:0005524|GO:0016301
Lele05g0574 483 TIGRFAM udk: uridine kinase 61 263 IPR000764 -
Lele05g0574 483 CDD UMPK 64 262 IPR000764 -
Lele05g0574 483 FunFam Uridine kinase 266 481 - -
Lele05g0574 483 SUPERFAMILY PRTase-like 265 482 IPR029057 -
Lele05g0574 483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 255 IPR027417 -
Lele05g0574 483 CDD PRTases_typeI 339 454 IPR000836 -
Lele05g0574 483 Gene3D - 266 481 IPR029057 -
Lele05g0574 483 Gene3D - 58 265 IPR027417 -
Lele05g0574 483 PRINTS Uridine kinase signature 62 79 - -
Lele05g0574 483 PRINTS Uridine kinase signature 194 204 - -
Lele05g0574 483 PRINTS Uridine kinase signature 137 152 - -
Lele05g0574 483 PRINTS Uridine kinase signature 208 219 - -
Lele05g0574 483 PRINTS Uridine kinase signature 92 103 - -
Lele05g0574 483 PRINTS Uridine kinase signature 230 243 - -
Lele05g0574 483 FunFam Uridine kinase 59 265 - -
Lele05g0574 483 PANTHER URIDINE KINASE 56 392 - -
Lele05g0574 483 Pfam Uracil phosphoribosyltransferase 280 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0574 Lele-ChrLele05 3370101 3374811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0574 1 483 PRT Gene Family AT5G40870 80.992 0.0 797