Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0570 ATGATCACTAAGCTTCTCCACCTGAGAGCTGTGGCCTTTTTGTTGTCGTTCTTCTTCTTCTTTGTCTTTTCGCTTAGAGAAGAGCTGATCAGCTGCAACACAACATCCCCAGAAACCTCTGCCTACTACCGTTGCAGTAATAATGAATCACAATGCGGAACATTTGCAGTTTTCTTCACCAATTCATACTACTCATCTCTCTTCAACTTGAGCTTTTACTTGGGATTCAATCGTTATGTGATTGCAGATGCAAATGGATTTTCTGCAGAAACAGAGTTTCTTCTTCATGAACAACCTTTACTGGTACCAATAGACTGCAAATGCAAAGGTGGCTTCTTTGGCGCGGAAATAACTAAAATTACTATTAAAGGTGAGAGCTTTTATGGTATTGCTCAATCTCTGGAAGGCTTGACAACTTGCATGGCTATTAGTGAAAAGAATCCAGGCGTATCACCTTGGGATCTCGATGATGCTATCAGATTGATGATCCCTTTGAGATGTGCATGTCCCTTATCATCATCATCTAAAGTTTCTCCAGAGCCGAAGCTTCTGATTTCTTACCCTGTGACAGAAGGCGATACAGTTCACAATTTGGCATCAAAGTTTAATACTACCGACGAAGCAATAATCTCCGCAAATAACATATTTCCCAAGGATTTCAAACCTGATGCGAAGCTCACACCTTTTACCTCTCTTCTGATCCCAGTCAATGGTAAGCCTGTTCTTGGTTCTCTGGCTAAACCCAATGAACCCAGTTCTGGTAATCGATCAGGCAGCAATATTACAGTGATTAAACCATCACACAGGAAGCCCAAGACGTGGAAGGCTGAATTGTACATTGGCTTAGCTGGGGTCGCAGTTGGATTTTTGTTTGCTTTACTGGCAGCTTTTGTTGTGGTTCGATTGAAGAACGACAAGAAAGAGAAATCAGTCAAAAGAAACAATTTGGAGCGGCAACATCTTAATATAAGCGTAAGAACCACCAGCGACAAGAAAGTTTCGTTCGATGGATCCCAGTATGGGAAAATCATCGACGCGACTCCTCGTAAGATGCTGCTGGAGACATACACCATTGAAGACCTGAGAAAAGCGACGGAGGATTTCAGTTCAAGCAATCTCATAGAAGGATCTGTATTTCACGGCCGTCTAGAAGGGAAGAGCATAGCAATCAAACAAACAAACACAGAAACGGCGTTAAAAATCGATCTTGGGCTCTTCCATAACACAATCCACCATCACCCCAACATTCTTCGAATGCTCGGAATGTGTATGACAGAAGATCCCGAGTCATATCTGGTTTTCGAGTATGCAAAAAATGGGTCTTTGAAAGACTGGCTTCATGGTGGGTTGGCCATAAAGAACGAGTTCATAGCATCCTGCTATTGCTTCCTCACATGGAGTCAGAGACTCAGGATCTGCCTCGACGTGGCCATGGCCCTGCAATATATGCACCACGTCATGAACCCAAGCTATGTCCATAGAAATATAAAGAGCAGAAACATCTTTCTAGACGACGAATTTGGCGCCAAGATAGGCAACTTTGGGATGGCAGGTTGTGTTGAGAACAAAACAGAGGATCCAAAGTTCTACTCGACCAACCCTGCATCTTGGAGTCTTGGTTATTTAGCACCAGAATATGTACACCAAGGTGTGATTTCTCCAAGTACTGATATTTTTGCTTATGGGGTGGTTTTGCTGGAAGTTTTGTCTGGTCAGACACCTACAAGCAGACCCAATGGGGGAGAAGGAAGCGTTTGGCTCACTGATAAAATAAACTCTGTTTTGAAGTCAGGAAATGAGGAAGAACTGAGAGGGTGGATGGACAAGGCATTAGGTGAGCATTATTCATTGGATGAAGCAACAACAGTGGCGAATATTGCTAGAGCTTGTGTGGAGGAAGATTATGGTATGAGGCCAAGTGCAGGGGAAATTGTGGAGAAGCTAACCAGATTGGTGGAGGAACTTCCAGAAGAAGACCACATGTTGATGTCTGAAAGCTCTTCCAAGCCTCTGGTGAAAGCACTGGCAAAACCCTGA 2037 0.435 MITKLLHLRAVAFLLSFFFFFVFSLREELISCNTTSPETSAYYRCSNNESQCGTFAVFFTNSYYSSLFNLSFYLGFNRYVIADANGFSAETEFLLHEQPLLVPIDCKCKGGFFGAEITKITIKGESFYGIAQSLEGLTTCMAISEKNPGVSPWDLDDAIRLMIPLRCACPLSSSSKVSPEPKLLISYPVTEGDTVHNLASKFNTTDEAIISANNIFPKDFKPDAKLTPFTSLLIPVNGKPVLGSLAKPNEPSSGNRSGSNITVIKPSHRKPKTWKAELYIGLAGVAVGFLFALLAAFVVVRLKNDKKEKSVKRNNLERQHLNISVRTTSDKKVSFDGSQYGKIIDATPRKMLLETYTIEDLRKATEDFSSSNLIEGSVFHGRLEGKSIAIKQTNTETALKIDLGLFHNTIHHHPNILRMLGMCMTEDPESYLVFEYAKNGSLKDWLHGGLAIKNEFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDDEFGAKIGNFGMAGCVENKTEDPKFYSTNPASWSLGYLAPEYVHQGVISPSTDIFAYGVVLLEVLSGQTPTSRPNGGEGSVWLTDKINSVLKSGNEEELRGWMDKALGEHYSLDEATTVANIARACVEEDYGMRPSAGEIVEKLTRLVEELPEEDHMLMSESSSKPLVKALAKP 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0570 678 MobiDBLite consensus disorder prediction 248 266 - -
Lele05g0570 678 CDD LysM 185 234 IPR018392 -
Lele05g0570 678 FunFam PTI1-like tyrosine-protein kinase 3 437 662 - -
Lele05g0570 678 Pfam Protein tyrosine and serine/threonine kinase 386 648 IPR001245 GO:0004672|GO:0006468
Lele05g0570 678 Gene3D LysM domain 171 241 IPR036779 -
Lele05g0570 678 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 18 655 - -
Lele05g0570 678 ProSiteProfiles LysM domain profile. 185 234 IPR018392 -
Lele05g0570 678 SUPERFAMILY Protein kinase-like (PK-like) 347 648 IPR011009 -
Lele05g0570 678 Gene3D Phosphorylase Kinase; domain 1 344 436 - -
Lele05g0570 678 MobiDBLite consensus disorder prediction 244 266 - -
Lele05g0570 678 Gene3D Transferase(Phosphotransferase) domain 1 437 669 - -
Lele05g0570 678 ProSiteProfiles Protein kinase domain profile. 329 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0570 678 Coils Coil 299 319 - -
Lele05g0570 678 Pfam LysM domain 187 235 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0570 Lele-ChrLele05 3344207 3346243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0570 38 673 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 40.813 9.17e-158 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele05g0570 PK_Tyr_Ser-Thr 8.2e-32 CL0016