Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0567 ATGGTGGGACGAGCCAAGCCCCTGACAATTTCGAAAAAGAAAGCAGGTCAGGAGATCAAACCTTGGCCCCCTACACAATCCCTCAGATCCCTTCGTTATGTATTAATTCAATGGGGAAATGGTGAACGCAGTTCAGGTTCTACCAATCTTGTTGTGCCCTCTCTTGGTTCTGTTATCGGTGAAGGAAAAATTGAATTCAATGAGTCATTTCATCTTCCTGTTACTCTGTTGAAGGATATGTCTGTAAGAGGTGGTAATGCTGATGTATTCCAAAAGAATTGTTTGGAGTTCAACTGATCAAATCCATTGAGTACAAGCGCCTATACTTTAGATGGGACAAATATTGGTTCGAAAGGAAATAGTCTGAAAAGTGAAAGATTAAAGCATGTAAAGTCTGTAAGGTCACCTACAGACTCAACATTGAGTACTGGATCACCTGGCAATCATCATGCTGAAGTAAAGGATGCTGGCATGGCTGGAGATGTGCAAAATAGTGGAGGGAATATCAGAGTCAGTGACAAAAAAGATGCCCAGGTTTATCCAAAGGAAGCAAGGAGTTCAATTTCAGACAGAAAAATCAATCTTTTGGAAAGCAAGATAAACATGCTTGAAGGAGAGTTAAGAGAAGCTGCGGCTATAGAGGTTGCTCTATATTCTGTAGTTGCTGAGCACGGAAGCTCCATGAGTAAGATATATGCCCCAGCTCGGCGCCTTGCTAGGCTGTATCTTCACGCTTGTAAAGAAAATCTTCAAGAAAGAAGGGCCGGGGCGGCTAAAAGTGCTGTTTCTGGACTAGTTCTTGTTGCAAAGGCATGTGGAAATGATGTCCCAAGAACAATTATATGCCAGACCACCAAAAAAGTGGCGCCTGCTGGACCAAGCGTAAAAAGGAAAATTGGGAGAGAGGGGAGTGACAACATAACTCCCTCATTGCGATGGAAGGGATACTCTCCCAGAAAAAATGAAAATACCACTGTTGCTCAAGGAGGTATTGATAACTGGGATGACCCCCTTGTATTCACATCAGCACTGGAAAAGACTCTGACTCCACACATGCATCATGTTGATGCAAAGGTCACCAAAAAGGGTGTGGGCTCTTCCTCATGGAAAACCTTCCGAAAGTTGTCTGGCTCATGTGATAATGAACAGGGGAAGTTTTCACAAGACATTTGGAAGAATGCTTTTAGGGAAGCCTATGAAAAGCTCTGTCCTATTCGAGCTGGAGGGCACAAGTGTAGCTGTTTGCCAGTGCCGTCCAGATTGATAATGGAGCAATGTGTGGCAAGATTGGACGTGGCTATGTTCAAAGCAATTCTTCGTCAAACTGCTTATGAAATCCCAACTGATCCTGTATCCGATCCAATTAGTGATCCCAAGATTGGGAACTGGTCTAGATGGCTTACAGACCTATTTGGTTTTGATGACGATGACTCACTTCAAGACAACGACGAACCTGAATCAGCTGCTAATAATGATGGGAGACAAAATGCAACTTGCAAGTCCTTCCATCTTCTTAATGCACTAACTATGGTGAAGGGAATTTTGTTTGTTAAGGATGATCTTGAGGATGGTGGAGTGTGCGTAAAAAACTTCCCATGCATTGCGACTCCCATAGGCTATATAACTCCCCCAGCATCTTCCATGGCAAGCATAATTGGAGAGGTTGGAAGCGAATATAAGCTGAGAAGAAGTAAATCTTCTGTTCTCGGCAAGGCATACGCCAGTGATGATGAGCTCGATGAATTAAACTCTCCCCTATCTTTCATATCAACGATGGTTTCATAA 1785 0.4325 MVGRAKPLTISKKKAGQEIKPWPPTQSLRSLRYVLIQWGNGERSSGSTNLVVPSLGSVIGEGKIEFNESFHLPVTLLKDMSVRGGNADVFQKNCLEFNXSNPLSTSAYTLDGTNIGSKGNSLKSERLKHVKSVRSPTDSTLSTGSPGNHHAEVKDAGMAGDVQNSGGNIRVSDKKDAQVYPKEARSSISDRKINLLESKINMLEGELREAAAIEVALYSVVAEHGSSMSKIYAPARRLARLYLHACKENLQERRAGAAKSAVSGLVLVAKACGNDVPRTIICQTTKKVAPAGPSVKRKIGREGSDNITPSLRWKGYSPRKNENTTVAQGGIDNWDDPLVFTSALEKTLTPHMHHVDAKVTKKGVGSSSWKTFRKLSGSCDNEQGKFSQDIWKNAFREAYEKLCPIRAGGHKCSCLPVPSRLIMEQCVARLDVAMFKAILRQTAYEIPTDPVSDPISDPKIGNWSRWLTDLFGFDDDDSLQDNDEPESAANNDGRQNATCKSFHLLNALTMVKGILFVKDDLEDGGVCVKNFPCIATPIGYITPPASSMASIIGEVGSEYKLRRSKSSVLGKAYASDDELDELNSPLSFISTMVS 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0567 594 Coils Coil 193 213 - -
Lele05g0567 594 MobiDBLite consensus disorder prediction 133 176 - -
Lele05g0567 594 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 523 589 IPR021827 GO:0005643
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0567 Lele-ChrLele05 3327971 3334711 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0567 05 3327971 3334711 Lele13g1228 13 22626901 22632351 CCT
Lele05g0567 05 3327971 3334711 Lele14g1124 14 20954694 20960018 CCT
Lele05g0567 05 3327971 3334711 Lele15g1231 15 7126563 7132026 CCT
Lele05g0567 05 3327971 3334711 Lele16g1263 16 7148864 7154995 CCT
Lele05g0567 05 3327971 3334711 Lele05g0567 05 3327971 3334711 ECH
Lele05g0567 05 3327971 3334711 Lele07g0594 07 3389728 3395274 hybridization
Lele05g0567 05 3327971 3334711 Lele08g0394 08 2423697 2434347 hybridization