Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0566 ATGCCTCAAGCTGATCCAATGAGACATTTGTCCCTGTGTCTTCTGGTCCTTTCGTGGACTTTGTCAATCCCAAGTACCCACAAACTACTATTTGCCCAGACCCAAGTCTTATTACAGATGAGGATGTATTTAGAGTACCCCGCCTCGCTGCAAAGTTGGGGAAATTATAATGGTGACCTCTGTAACCTTTCTTCTTCTGCACATGTGAGCATTAAATGTCAAGATAACTCTGTATCTGAGCTTAAAATTAGGGGAGATAAAACTGCGAAGTCTGACAAGTTCAATGGATTTGCAATTCCCAATCAAACGCTGTCGACGAACTTCTCTATTGATTCTTTTATCACTGCATTAACGAGGTTGACCAGTTTAAGGGTTCTTAGCTTAGTATCCTTGGGAATTTGGGGTCCTCTTCCGGATAAGATTCACCGATTATCTCTGCTCGAAATTTTGGACTTAAGCTCAAATTTCTTATTCGGTTCTATCCCACCGAAAATTTCCACAATGGTAAAGCTCAGTACACTGAAACTCGATGGCAATTACTTCAACGACACAGTGCCCGAATGGTTCGATTCATTGTCTAATCTAAATGTATTGAGTTTGAAAACCAACACGTTGCGGGGTTCATTCCCCTCGTCATTGTGCAAAATTAAGACCCTCACCGATATTTCTGTGTCTCACAATGAGCTTTCTGGCAAATTACCTGATTTGAGCGCTCTCACTGGCCTACATGTCCTGAATTTAAGAGAAAACCGTTTAGGTTCTGAACTGCCATTGCTGCCCACAGGAGTGGTCACAGTTCTGCTCAGCAGTAACTCATTTTCTGGCGACATACCGAAGCAGTTCGGTCAATTGGGTCGGCTTCAACATCTAGATCTCTCGGCAAATCATCTGAGTGGAATACCTCCATCTTCCTTGTTCTCATTGCCAAACATCAGTTATTTGAATTTAGGTAGCAATGTGCTGAGCGGGTCACTTCCAGATCAACTGGGTTGTGGCAGCAAACTTTGTTTTGTGGATATTTCCAGTAACAAATTAATTGGTGGACTTCCTTCTTGCTTGGCCAATACGTCCGATAGAAGAGTTGTCAAATATGATGGAAATTGTTTAACTGTCGATTCTCAAGATCAGCGGCGACGGCCTTATTGTGAAGAATCCAATATGAACAAGAAGAAATCGATGTCATGGAAAATAACTGTATCAGGGGCGATTATTATTGGACTTGTTCTTGTACTTGGGATTTCGATATTAGCAGTTCTCTTTTGTAGAAAATGTCTGAGGAGAGAGACAGATAAGCACCATTTGTTGCCAAAGCAAGATAACTCCACTACAGGGTTTTCATCTCAACTCCTCGCAAATGCCAGATTCATTTCTGAGGCAGTGAAACTAGGGGCACAAGCTACATCAATCTGTCGACCAATTTCAGTTGAAGAGTTGAAGGAAGCCACAAGAAACTTTGACTTGTCAGCGTTTATTGGTGAAGGCTCCTTAGGAAAGCTATACAAAGGTAAACTGGAGAATGGATCCTACGTGGCAATACGATTTTTAGCTCTGTCAAAGAAATGCTCAACTCAAAATCTTAAAGCTCGGTTGGCTTTACTCTCAAAGCTTCAACATCCAAATTTGGTCAGCCTCTTGGGTTACTGTATCGATGCTAATGAACAAGATGATTCAACCCCCGACAAACTTCATCTTGTATATGAGTACGTGCCCGATGGGAGTTACCGTACCTACCTGACAGAGTTTTCTCTTGAGAAGCCGCTCAAGTGGTCTGATAGATTGGCAATTTTAATTGGGGTTGCCAAGGCTGTGCACTTTTTACATACCGGGGTTATTCCAGGTTGTTTTAACAACAGATTAAAGACAGACAATATTTTGCTTGATGAGCATCACTTTCCCAAATTAAGTGACTATGGAATGTCCATACTCGGAGAAGAGATTGAAAGGTTTGAGGCAAAGAGACATCACTCAAAATCATGCCAAAAGGCATCATTTGAGGATGATGTTTATAACTTTGGATTCATATTGCTGGAATCACTTGTTGGACCCATAGCAAGCGGACAAGGGGAAGCGTATTTTCTGAATGAGAAGGCATCCTTCGGAAGTCAAGATGGTAGAAGAAAAATTGTGGATCCCATAGTGTTGACATCTAGCTCTCAAGAGTCACTATCAATCGCCATAGCTATAACAACAAAATGCATATCTCCAGAACTATCCTCCCGCCCCTCATTTGAGGATGTCTTGTGGAACTTACAGTATGCAGCTCAAGTGCAGGCCACAGCAGATTCAGACCAGAAATCAGAGTCTACGTCAGAATCTCAAGATTATAAGAGGGACAAAACCTGGGATTCAACTGGTTCATATATCTCTCCAACAAAGCATATCATTAAACCCCAGAATCATCATCAGGATCCATAA 2415 0.4182 MPQADPMRHLSLCLLVLSWTLSIPSTHKLLFAQTQVLLQMRMYLEYPASLQSWGNYNGDLCNLSSSAHVSIKCQDNSVSELKIRGDKTAKSDKFNGFAIPNQTLSTNFSIDSFITALTRLTSLRVLSLVSLGIWGPLPDKIHRLSLLEILDLSSNFLFGSIPPKISTMVKLSTLKLDGNYFNDTVPEWFDSLSNLNVLSLKTNTLRGSFPSSLCKIKTLTDISVSHNELSGKLPDLSALTGLHVLNLRENRLGSELPLLPTGVVTVLLSSNSFSGDIPKQFGQLGRLQHLDLSANHLSGIPPSSLFSLPNISYLNLGSNVLSGSLPDQLGCGSKLCFVDISSNKLIGGLPSCLANTSDRRVVKYDGNCLTVDSQDQRRRPYCEESNMNKKKSMSWKITVSGAIIIGLVLVLGISILAVLFCRKCLRRETDKHHLLPKQDNSTTGFSSQLLANARFISEAVKLGAQATSICRPISVEELKEATRNFDLSAFIGEGSLGKLYKGKLENGSYVAIRFLALSKKCSTQNLKARLALLSKLQHPNLVSLLGYCIDANEQDDSTPDKLHLVYEYVPDGSYRTYLTEFSLEKPLKWSDRLAILIGVAKAVHFLHTGVIPGCFNNRLKTDNILLDEHHFPKLSDYGMSILGEEIERFEAKRHHSKSCQKASFEDDVYNFGFILLESLVGPIASGQGEAYFLNEKASFGSQDGRRKIVDPIVLTSSSQESLSIAIAITTKCISPELSSRPSFEDVLWNLQYAAQVQATADSDQKSESTSESQDYKRDKTWDSTGSYISPTKHIIKPQNHHQDP 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0566 804 MobiDBLite consensus disorder prediction 759 804 - -
Lele05g0566 804 Pfam Protein tyrosine and serine/threonine kinase 488 747 IPR001245 GO:0004672|GO:0006468
Lele05g0566 804 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 398 772 - -
Lele05g0566 804 SUPERFAMILY L domain-like 103 371 - -
Lele05g0566 804 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 263 387 - -
Lele05g0566 804 Gene3D Phosphorylase Kinase; domain 1 449 568 - -
Lele05g0566 804 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 569 769 - -
Lele05g0566 804 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 448 568 - -
Lele05g0566 804 Gene3D Ribonuclease Inhibitor 31 263 IPR032675 -
Lele05g0566 804 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 31 261 - -
Lele05g0566 804 Pfam Leucine rich repeat 264 321 IPR001611 GO:0005515
Lele05g0566 804 Pfam Leucine rich repeat 170 229 IPR001611 GO:0005515
Lele05g0566 804 Gene3D Transferase(Phosphotransferase) domain 1 570 779 - -
Lele05g0566 804 Gene3D Ribonuclease Inhibitor 264 396 IPR032675 -
Lele05g0566 804 SUPERFAMILY Protein kinase-like (PK-like) 468 750 IPR011009 -
Lele05g0566 804 ProSiteProfiles Leucine-rich repeat profile. 286 307 IPR001611 GO:0005515
Lele05g0566 804 SMART LRR_typ_2 144 168 IPR003591 -
Lele05g0566 804 SMART LRR_typ_2 308 332 IPR003591 -
Lele05g0566 804 SMART LRR_typ_2 284 307 IPR003591 -
Lele05g0566 804 SMART LRR_typ_2 239 262 IPR003591 -
Lele05g0566 804 ProSiteProfiles Protein kinase domain profile. 485 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0566 804 MobiDBLite consensus disorder prediction 767 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0566 Lele-ChrLele05 3323339 3326731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0566 12 698 Miscellaneous Gene Families AT5G14210 58.106 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lele05g0566 PK_Tyr_Ser-Thr 1.1e-19 CL0016