Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0550 ATGTTTTTTGATGATCCTTTTTCTTTAACTTCGAAGAGGAGAAGGGTCACAGCGATTGATTCCATGGATGCTGAAGCAGCTAAGGCTAAGCTTGCAGCCATCAAGGAAAGGTTTGGGCGAGAGATCCGTGTATTTGAAACCTTGGTAGCTTCTGCAGCACCAAATACTGCCCCCAGCAGTGAAGAGACTGATGATTTCTATGAGTTCACCGCTGAAGATTATTATCGACTGTTGGCAACTAAAAAGGAAGATAAATTCTTGAAGACTCGCAAAATCCGAGAAGCAGAAGAGGCAGCTCGTAGATCAAGAATAACCAAAGCTGTGATTAGAGTTCGCTTTCCCGATAATCACACGGTAGAGGCTACCTTTCACCCTTCAGAAACACTCCAGAGTTTAGTTGATCTCCTCACCAAAGTGATTGCACAACCGGAGCAGCCATTTTATCTATATACTACTCCACCTAGGATGCTGATTAAAGACATGTCTCAAGATTTTTATGCTGCTGGCTTTTGCCCCGGTGCCATTGTGTACTTTTCCCATGATACTCCCCAGGGGGAAAGCACCATGACGGGGCCTTACCTACTAGAGGATATGATGTCTTTGAAGGGCTTGGATGTTACTAGTGATCAAGGCCAGCAATCTGAAACCACACAGTCCGCACCGGAACCTGTTGAAGCTTCACAAACGCCTGCTGTTCAAGAACGCAAGCCTGCTGATAAGAAGGTTGTGAAGCCGAAGTGGTTAAAATTGTGA 753 0.4529 MFFDDPFSLTSKRRRVTAIDSMDAEAAKAKLAAIKERFGREIRVFETLVASAAPNTAPSSEETDDFYEFTAEDYYRLLATKKEDKFLKTRKIREAEEAARRSRITKAVIRVRFPDNHTVEATFHPSETLQSLVDLLTKVIAQPEQPFYLYTTPPRMLIKDMSQDFYAAGFCPGAIVYFSHDTPQGESTMTGPYLLEDMMSLKGLDVTSDQGQQSETTQSAPEPVEASQTPAVQERKPADKKVVKPKWLKL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0550 250 Gene3D - 96 179 - -
Lele05g0550 250 MobiDBLite consensus disorder prediction 206 250 - -
Lele05g0550 250 MobiDBLite consensus disorder prediction 234 250 - -
Lele05g0550 250 MobiDBLite consensus disorder prediction 206 226 - -
Lele05g0550 250 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 1 250 IPR044232 GO:0032984|GO:0051117
Lele05g0550 250 CDD UBX2_UBXN9 107 179 - -
Lele05g0550 250 Pfam UBX domain 105 163 IPR001012 GO:0005515
Lele05g0550 250 SUPERFAMILY Ubiquitin-like 81 178 IPR029071 -
Lele05g0550 250 ProSiteProfiles UBX domain profile. 102 178 IPR001012 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0550 Lele-ChrLele05 3228266 3236095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0550 36 127 C2H2 Transcription Factor Family AT2G01650 35.417 3.91e-07 48.5