Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0537 ATGTGTCACAGCAAAACACCTCCTCCTCCTTCTCGTCGTTCCGATCTCGCTCACAGTAACTCCGATTCTATTATCAAGATCAGAGATCCTCTGAGTCGTCTTGTAACACCTCGCCGTAAGAACAGAACAAAGACCAGGAAGCCTAAGTTCCTGAGTCTTCGTCTTCAACTTTCATCAAACCAATCCAATCCAATGACACATCATCAACAGCTCAACCTCTTCCCCTTGCACCCTGAAAATTTGATCCACGACAAAGATGTCATGCACGACGACCACAACGTTGCTTTCCTCTTCACTTCCCATGGCCCATCCACACTCAACGGCCTGCTCGAACAGGACTCCACCGCCACCACCACAAACACCACCGTGTCCGAGGAGGATTCTATGTCGCCACAGTGTTTGAGGGCGTGCCCTTTCGATGAGGAAAACGGGAGCTCGTTGGTACGGAAGGCGATGAAGAGGAGGAACGAGGAGGGGGAAAGGGACGGAAGGGAGGAGAGGTGGGTGTGTTACTCGGAGGTCACAAGCTATTGCAGCGCCACCACGACGGAGAGCACCGACGCTGCCACGGCGTCGGTTGGGTTACTGTCGTTGAAGCTGGATTATGAAGGTATATTAAATGCTTGGTCTGACAAAGGTCCTCTCTATGTTCCGGGAGAGACCCCACACGCTGTCCCCGACTTCCTCGATCATGTCCTTCCACACCATCCGCCGCATGTAGTGTGGGAAGAGAGTGAGAAGAAGATGAAAGGGAAGGAAGAAATGGGACAAAGGGAGGCAAGCGTGTTAAGATACAAAGAGAAGAGGCAAAGCAGGCTCTTCTCCAAGCGAATCCGCTACGAGGTTCGTAAGCTCAATGCTGAAAAGCGCCCCAGGATGAAGGTACTCCTTAAGGACTGGGAAGAACGTAGTTCGCCAATACTCCAGCGTCCTCTTAGAATACTTGTTCACTTTCTATTGCTGTTCCCAGTAGATTTGGCAGATTTCTTGATTATGTTGTAA 1002 0.508 MCHSKTPPPPSRRSDLAHSNSDSIIKIRDPLSRLVTPRRKNRTKTRKPKFLSLRLQLSSNQSNPMTHHQQLNLFPLHPENLIHDKDVMHDDHNVAFLFTSHGPSTLNGLLEQDSTATTTNTTVSEEDSMSPQCLRACPFDEENGSSLVRKAMKRRNEEGERDGREERWVCYSEVTSYCSATTTESTDAATASVGLLSLKLDYEGILNAWSDKGPLYVPGETPHAVPDFLDHVLPHHPPHVVWEESEKKMKGKEEMGQREASVLRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKVLLKDWEERSSPILQRPLRILVHFLLLFPVDLADFLIML 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0537 333 Pfam CCT motif 258 294 IPR010402 GO:0005515
Lele05g0537 333 ProSiteProfiles CCT domain profile. 258 300 IPR010402 GO:0005515
Lele05g0537 333 MobiDBLite consensus disorder prediction 1 23 - -
Lele05g0537 333 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 11 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0537 Lele-ChrLele05 3155287 3156969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0537 196 294 C2C2-CO-like Transcription Factor Family AT1G73870 44.762 2.00e-19 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele05g0537 CCT 1.4e-13 CL0281