Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele05g0519 | ATGTCGAAATCATTATATCTAACTCACGTATCGTTCTTCTTATCTAATTCTAGAGTTATGGCCTCTGCAAGAGTTTTCTATCATGTGCTTCCATCTACGAAATTCACATCCTTCAACAAAGCAGGCACTTTCTCCCTATCATCCTCCCTACGAAACTACTCCACCACTCAAACCCCATACCCACTTCAGTACGAGATGATTATCAACCGTCCAGTCAATTCCGTGCATGCCCACTCTCGCCGTCGACCTGTTCGACAAAATGACTCCAACGCAGAGAGCTTTCCTGACTCCGAGTCTCCGGAAGAGTCCGTTTCTCCAGAAGAGTCAGTTTCTGAATTGGGATTAGATAGCTGGGTCGATCGGAAATTGGCTTTTGAGGAAGAAGCTAATCAACCCGGTTCCCAAAAAGCGGAGCTTGACAAGGCTAAGAAAAAATATTACAGAAAACGGAGCAAGAGGATGTATGGGTCGGACTCTGATGAAGAAAATAGGCGACCCGAAGAGAAGTTCGTGGAACTGAAGCCTGAGGTGGTAGAGCTTCCTACATTGCACAAGAGAGAGGAGGAATTGTATTTCTACGATACGTTTTCTTACCCGTGGGAAAAGGAGAAGCATTATAAGATGGTCTATCAGTTGGAGAAGAAATATTTTCCTGATCAGTGTCTTGATAAAGCGTTCCTAGAACCGGGGGAATCAAATGTAAACGTGAATGTAAATACGGATACAAAGACTAAGAGCAAGGCGAGGGAAAAGAAGAAAGTCAGGGAAGATAGAAGAGAGCAAAAAGATGAGGCTAGTGATGAAAGAAATGATAAGAAGTTGATATTCTTCGAGGAGAAACAAGAAGAGAAAAAGGATAATAGAGGATTAGTTAAGGAAGCAAGAGAAGATCTAACCGAAAAGAAGGTCGAAGAGTTCTTCAAATATTTGAAGAAAATTCCTAATAAGGATGTTGAAGTGGGTAATGCTGAGCCGTTTCTTGGGTCAAGGAATTCGGGGCTTCCTCCTAGATGGGATAGCCCTCGTGGAACCGTTGTTTTGGTGAATAAACCCAAAGGTTGGACTTCATTTACAGTTTGCGGGAAGCTGCGTCGCTTAGTCAAAGTGAAAAAGGTTGGTCATGCTGGAACTCTTGATCCAATGGCTACGGGTTTATTGATTGTTTGTGTTGGTAAAGCAACAAAACTTGTGGATAGATATCAAGGGATGATTAAGGGCTATAGTGGTGTTTTCCGCCTAGGGGAGGCTACTTCAACATGGGATGCTGATTCACCGGTCATTCTGCGTGAGCCATGGGAGCACATCAAAGATGAGGACATAAAGAGAACTGCAGCATCCTTTTCTGGTGAGATTTGGCAAGTTCCCCCAATGTTCTCTGCCATTAAAGTTGGAGGTGAGAAAATGTACGAGAAAGCAAGGAGAGGAGAAAGCATTGAACTTTCACCTAGACGAATATCAATTTTCCAGTTTGACATAGAGCGTAGTTTGGATGATAGACAAAATTTGATTTTTAGGGTAACATGTTCCAAAGGGACATATATTCGGTCACTATGTGCAGATTTTGGGAAAGCTCTTGGCAGTTGTGCCCATTTAACTGCTCTCCGGAGAGATTCAATAGGAGAATATTCAGCAGATGATGCATGGGAGTTTGCAGAGCTGGAAGAGGCTATTTCCAAAAGTTATTTCTAA | 1689 | 0.4275 | MSKSLYLTHVSFFLSNSRVMASARVFYHVLPSTKFTSFNKAGTFSLSSSLRNYSTTQTPYPLQYEMIINRPVNSVHAHSRRRPVRQNDSNAESFPDSESPEESVSPEESVSELGLDSWVDRKLAFEEEANQPGSQKAELDKAKKKYYRKRSKRMYGSDSDEENRRPEEKFVELKPEVVELPTLHKREEELYFYDTFSYPWEKEKHYKMVYQLEKKYFPDQCLDKAFLEPGESNVNVNVNTDTKTKSKAREKKKVREDRREQKDEASDERNDKKLIFFEEKQEEKKDNRGLVKEAREDLTEKKVEEFFKYLKKIPNKDVEVGNAEPFLGSRNSGLPPRWDSPRGTVVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVDRYQGMIKGYSGVFRLGEATSTWDADSPVILREPWEHIKDEDIKRTAASFSGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFQFDIERSLDDRQNLIFRVTCSKGTYIRSLCADFGKALGSCAHLTALRRDSIGEYSADDAWEFAELEEAISKSYF | 562 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele05g0519 | 562 | Coils | Coil | 251 | 271 | - | - | |
| Lele05g0519 | 562 | MobiDBLite | consensus disorder prediction | 75 | 113 | - | - | |
| Lele05g0519 | 562 | TIGRFAM | TruB: tRNA pseudouridine(55) synthase | 344 | 553 | IPR014780 | GO:0001522|GO:0003723|GO:0009451|GO:0009982 | |
| Lele05g0519 | 562 | MobiDBLite | consensus disorder prediction | 88 | 106 | - | - | |
| Lele05g0519 | 562 | Pfam | TruB family pseudouridylate synthase (N terminal domain) | 364 | 514 | IPR002501 | GO:0006396 | |
| Lele05g0519 | 562 | CDD | PseudoU_synth_EcTruB | 345 | 556 | IPR014780 | GO:0001522|GO:0003723|GO:0009451|GO:0009982 | |
| Lele05g0519 | 562 | FunFam | tRNA pseudouridine synthase B | 339 | 561 | - | - | |
| Lele05g0519 | 562 | Pfam | tRNA pseudouridylate synthase B C-terminal domain | 515 | 558 | IPR032819 | - | |
| Lele05g0519 | 562 | Coils | Coil | 277 | 297 | - | - | |
| Lele05g0519 | 562 | MobiDBLite | consensus disorder prediction | 243 | 267 | - | - |
Showing 1 to 10 of 15 entries
Duplication type information
Functional genes information