Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0508 ATGGAGAAACAGGTCGTTGAAAACCTATGGAAGGGTGAGAGAGCAGCTCAGATTCAAGCAGCAGTGGAGCTCACTAGATTAAGCAGCAAGCAAAGACACAAGTTAGCAGAAAAAGGAATAATGGTTCCTCTTATTTCCATGCTCCATTCTCAAGACCATGAAGCTATTGAAGCTTCTCTCTGTGCTCTGCTCTGTCTTGCCTTTGGCAGTGAACGAAACAAGATTCGGATCGTCGAGTCTGGAGCTTTACCAGTGTTATTGAATCTCCTCCAATGCCAAAGCCAACCACTGATAGAACTAACAATAGCTGCTATGCTAACTCTTTCTTCTTGCAAAGCAAATAAGCTACCAATAGCTTCATCTGGTGCTATTCAATTACTGATACAAATGATCAATGGCGATTATGTTCATGGCATAAACGCTCAATCCCAGCTTGACGCCATAGCCACACTCCATAACCTCTCAACCTGTAAAGAGATAACATCATTGCTAGTCTCTTCTGGTATAACAATGTCCTTACTTGAACTGATTCACAAGTCAGGAAAATCAAGTGAGACAGCTGAGAAAGCAATTGGGTTGCTGGAAAACATTGTGTATTCATCAGAGAGAGCATTAAGCGAAGCTTCAAGCATAGGAGGGGCCATAAGGATAGCGGTTGAGACCATTGAAGAAGGTTCCATGATAGGGAAAGAGCATGCTGTGGGGATTCTGCTTCTGATATGCAAAAGTTGCAGAGAGAAATACAGAGGAATGATACTGAGAGAAGGAGTCATGCCTGGTCTGCTTCAGTTAAGTGTGGATGGAACACAGAGAGCTAAAGGGATGGCTAGAGAATTATTGCTGCTTCTGAGGGATTGCTCTAATTATGGTTCAACAAGTGGGAAGAAGATGAATCATGAGATAATAGAACAGATAATGAAGGAGATTGATGAAGAAGGTGAGGAATTAGCTGGGAGTACTTTGAGATTGGTGGAGGAGATGATTGCCAAGCTCCATACATGA 1002 0.4261 MEKQVVENLWKGERAAQIQAAVELTRLSSKQRHKLAEKGIMVPLISMLHSQDHEAIEASLCALLCLAFGSERNKIRIVESGALPVLLNLLQCQSQPLIELTIAAMLTLSSCKANKLPIASSGAIQLLIQMINGDYVHGINAQSQLDAIATLHNLSTCKEITSLLVSSGITMSLLELIHKSGKSSETAEKAIGLLENIVYSSERALSEASSIGGAIRIAVETIEEGSMIGKEHAVGILLLICKSCREKYRGMILREGVMPGLLQLSVDGTQRAKGMARELLLLLRDCSNYGSTSGKKMNHEIIEQIMKEIDEEGEELAGSTLRLVEEMIAKLHT 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0508 333 FunFam U-box domain-containing protein 4 205 322 - -
Lele05g0508 333 PANTHER U BOX DOMAIN-CONTAINING 5 286 - -
Lele05g0508 333 SMART arm_5 157 199 IPR000225 GO:0005515
Lele05g0508 333 SMART arm_5 70 110 IPR000225 GO:0005515
Lele05g0508 333 SMART arm_5 28 68 IPR000225 GO:0005515
Lele05g0508 333 SMART arm_5 111 156 IPR000225 GO:0005515
Lele05g0508 333 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 81 123 IPR000225 GO:0005515
Lele05g0508 333 Gene3D - 3 331 IPR011989 -
Lele05g0508 333 FunFam U-box domain-containing protein 4 3 201 - -
Lele05g0508 333 SUPERFAMILY ARM repeat 4 317 IPR016024 -
Lele05g0508 333 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 168 212 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0508 Lele-ChrLele05 2996875 2998360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0508 4 285 U-box Gene Family AT3G54790 32.867 5.56e-27 109