Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0506 ATGGAGTCAGCTGTGAACGGAGCCGAGTCTATATCAGAGCTTCTGAATTCGGTCTCTGCACAAGATCACGATTCTGCTTCAACATCTGAAACTCCAAAATCTTCTTCCCTGCCTCCTTTAAGAGCATCATCAAGAAATTACGGAATTAAGATTCAACAAAAGCACCCTTACCAGGAAACCAACCAAGAATTACCAAATACGGCCAAGCAAAATCTCAATTCTAGTGGAAAATCAAGAGAAATTAGTCCAGGGAAGAATATATCTATGATGGAGACAAAGAATTACGATGCAAAAGGCATATCGGCCCCATGTAAAGGAGTTGTAATTGATCAAACAAAGAGCTGCTCTCAGTCAGATGTAACGTTTTGTGCAAGTCCTCAGAATAGCTTCTATTCTGCTGCGGCTACCTATTCAGAAGCCAAACAAAGTTTCGCCAATACTGAAGCTAGTGAGTGTGTTAGTGTGGATAAGTCAGGTGAAAGTGGTGAAGCCACAAACTCTGGTGACTTCAATGAAAGCAGGAAGACCAGCATCTGTAGAGGGAGTACTGGGAGTGATCTGAGTGATGAGAGTAGCACAAGTAGTTTGAGCAGTGCTATGTATAAACCTCACAAGGCTAATGATATAAGATGGGAAGCGATTCAAGCCGTGCGAGCTCGGGACGGAGTGCTGGAAATGAGGCATTTCAGGTTGTTGAAGCAATTAGGATGTGGGGACATAGGAAGTGTGCATCTTGCAGAGTTGAGTGGCACAAGGACATGTTTTGCAATGAAGATAATGAACAAAACAGAGCTGGCTAGTAGGAAGAAGCTTCTGAGGGCTCAGACAGAAAGAGAGATCTTGCAGTCTCTGGATCACCCTTTTTTGCCCACATTATATACACATTTTGAGACAGAGACGTTCTCTTGCTTGGTCATGGAGTTTTGCCCTGGTGGGGACTTGCATGCGCTCAGGCAAAGACAGCCTAGGAAGTATTTCTCGGAGCATGCTGCCAGGTTTTATGTAGCAGAAGTTCTTCTTGCTTTGGAATACCTTCACATGCTCGGGATCATCTACAGAGACCTCAAACCAGAGAACGTCTTGGTGCGGGAAGATGGTCACATAATGCTCTCAGACTTTGATCTCTCTCTGCGTTGCGCCGTGAGTCCAACTCTCGTAAAATCCTCAAAGTCAACTGTAGACGTAAGAACTTCTGGATACTGCATTCAACCAACCTGCATTGAACCGACCTGCGTGATGCAGCCAGATTGTATCCAGCCCTCCTGTTTCACGCCTCGATTTCTAACAGGCAAAAAGAAAGATAAAAGGCCCAAACCAAAGAACGAAACGCCTCACCAGGTGACTCCTCTCCCGGAGCTCATCGCCGAACCAACAAACGCCCGTTCCATGTCCTTCGTAGGCACACACGAATACTTAGCACCCGAAATCATCAAAGGCGAAGGCCACGGAAGTGCAGTGGACTGGTGGACGTTCGGGATATTCTTGTACGAGCTTTTGTTCGGAAGAACGCCGTTCAAGGGGTCGGCAAACAGGGCGACTCTGTTCAACGTGGTGGGGCAGCCATTGAGGTTTCCAGAATCACCCAGCGTTAGCTTCGCTGCTAGGGATTTGATCAGAGGATTGCTCGTGAAAGAGCCTCAACATCGTCTGGCTTATAGACGAGGAGCGACGGAGATCAAACAGCACCCATTCTTTCAGAACGTGAATTGGGCGCTGATACGGTGTGCGAACCCTCCCGAGGTTCCAAGGATGGTGGCCTTGAAAGAGATGGCGGCGGCTCAGAAAGTGCCTGGCGTTAAGCCTGCCGGTAACTATTTAGATATTGATTTCTTTTGA 1836 0.4711 MESAVNGAESISELLNSVSAQDHDSASTSETPKSSSLPPLRASSRNYGIKIQQKHPYQETNQELPNTAKQNLNSSGKSREISPGKNISMMETKNYDAKGISAPCKGVVIDQTKSCSQSDVTFCASPQNSFYSAAATYSEAKQSFANTEASECVSVDKSGESGEATNSGDFNESRKTSICRGSTGSDLSDESSTSSLSSAMYKPHKANDIRWEAIQAVRARDGVLEMRHFRLLKQLGCGDIGSVHLAELSGTRTCFAMKIMNKTELASRKKLLRAQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPRKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSKSTVDVRTSGYCIQPTCIEPTCVMQPDCIQPSCFTPRFLTGKKKDKRPKPKNETPHQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCANPPEVPRMVALKEMAAAQKVPGVKPAGNYLDIDFF 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0506 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 350 362 IPR008271 GO:0004672|GO:0006468
Lele05g0506 611 Gene3D Transferase(Phosphotransferase) domain 1 313 381 - -
Lele05g0506 611 PANTHER FLIPPASE KINASE 1-RELATED 54 587 - -
Lele05g0506 611 MobiDBLite consensus disorder prediction 155 199 - -
Lele05g0506 611 Pfam Protein kinase domain 230 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0506 611 Pfam Protein kinase domain 462 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0506 611 FunFam serine/threonine-protein kinase D6PK-like 313 380 - -
Lele05g0506 611 FunFam Serine/threonine-protein kinase D6PK-like 227 312 - -
Lele05g0506 611 ProSiteProfiles Protein kinase domain profile. 229 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0506 611 Gene3D Transferase(Phosphotransferase) domain 1 459 583 - -
Lele05g0506 611 Gene3D Phosphorylase Kinase; domain 1 227 312 - -
Lele05g0506 611 SMART serkin_6 229 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0506 611 SUPERFAMILY Protein kinase-like (PK-like) 206 584 IPR011009 -
Lele05g0506 611 MobiDBLite consensus disorder prediction 1 87 - -
Lele05g0506 611 FunFam serine/threonine-protein kinase D6PK-like 460 583 - -
Lele05g0506 611 CDD STKc_phototropin_like 227 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0506 Lele-ChrLele05 2983761 2986583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0506 137 611 AGC Kinase Gene Family AT5G47750 71.079 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele05g0506 Pkinase 3.5e-37 CL0016