Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0495 ATGGCTTCTTCTTCAAGCTACTCAAATTCTCCATGTGCTGCTTGCAAGTTTCTGAGGAGGAAATGCATGCCAGACTGCATATTCGCGCCATATTTTCCACCAGAGGAACCTCAGAAGTTTGCAAATGTTCACAAAATATTTGGAGCGAGCAACGTGAGCAAGCTGCTGAACGAAGTTGAACCACATCAGAGAGAAGATGCTGTGAATTCTCTGGCTTATGAAGCTGAAGCGAGGATCAAAGATCCAGTGTATGGCTGTGTAGGGGCCATTTCTGTGCTGCAGAGGCAAGTGATTAGGCTTCAGAAAGAACTTGACGCAACTAATGCCGATTTGATTCGCTATACTTGCAATAATGAGATTCCTTCTGCAAGAAGAACGGGTGATGATCAAGGAGGTGGTGCTGGTTCTACGTCTCTTGGTCAATCTCCTTCTGACTATTATTATCCTTCTCCTTGGAATAATTACTAG 468 0.4423 MASSSSYSNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVEPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQKELDATNADLIRYTCNNEIPSARRTGDDQGGGAGSTSLGQSPSDYYYPSPWNNY 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0495 155 Pfam Lateral organ boundaries (LOB) domain 11 107 IPR004883 -
Lele05g0495 155 MobiDBLite consensus disorder prediction 131 155 - -
Lele05g0495 155 MobiDBLite consensus disorder prediction 122 155 - -
Lele05g0495 155 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Lele05g0495 155 Coils Coil 90 110 - -
Lele05g0495 155 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0495 Lele-ChrLele05 2909194 2909661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0495 1 114 AS2 family AT5G63090 86.842 3.32e-70 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele05g0495 LOB 7.6e-43 No_clan