LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele05g0482	ATGTACCTATGCGGTAGGAGGAGTAGTCCCTTGCCCCCAAGTAAGAAAGCAGCCTATATATCCCACCTGTGCCAGTTGCCACCCGATCCAACGCATCCGAAAGTTCAAAGCGCCTCAAATTCCGTCCAAGTTATAAGAAAGATTCCACCTTCCAGTATTCCATACTTTGCCATTTCTCTGCCTTACATATACTACGACCGCTCAAATTGCATCTCTCACTCTCGCTCCACCACATTCTGCAAGCACACCCCACAGTTCGCCACCATGCAACCTCACTTCTCCCCTAAAGAGGTCGATGTCCATGACAGAGCCACCGTGTTCCACCCACTCTCGCTCGCCCCACCTCACATGCTTGCCTTCCATCTTGCATGGCTCAACCTCTTCTCTTGCTTCTTCTCCACCTTCGCCATCCCTCCCCTCCTCCCCGTCATCCACCACCACCACCACCTCCACCTCACCCCCACTGACATTGGAAACGCCGGCATCGCCTCCTTCGTCGGCTCCATCTTCTCCCGCCTCCTCATGGGCCCCACCTGTGACCTCGTCGGTCCCCGCATAGCCTCTGGCACTCTCTCCCTCCTCACGGCACCTGTCATCCTTGCAACCGCTTTCGTGTCCACGGCTCAATCCTTCATCATCATTCGCTTCCTTGTCGGGTTCTCTCTGGCCAACTTCGTGTCGAGCCAGTTCTGGATGAGCTCCATGTTCTCCTCCTCCATAGTAGGCCTAGCAAACGGAGTTGCCGCCGGGTGGGCCACCGTGGGTTCGGGTGTGACCCAAATAGTGATGCCTCTGCTCTACTCTCTCATCATCAACTTCAACGTACCGTCTTCCATTGCTTGGAGGCTTGCGTTCGTTGTTCCTGCAATTTTCCAAGCAATCACGGGAATACTGGTGCTGGCTTTCGGGCAAGACCTGCCTTCGGGGAAGTACGTGCGTGCCCAGACCCAGAAGGCCAAAGGAGAGAACGTATTTAAAGTTATATTTGACGGCTTGTCCAATTACAGAGGCTGGGTTTTGGCTCTGCTTTATGGGTTCTCTTTCGGGGTGGAACTAACTACAGACAACATCATAGCACAGTACTTTTATGATAGGTTTAACGTGAATATTGAAGTTGCGGGGAGTATTGCAGCGAGTTTCGGGATGGCGAATTTGTTCTCACGGCCGATGGGAGGAGTGTTCTCTGATGGCTTGGGAAGGAGGTTTGGCATGAGAGGTAGATTGTGGGGTCTGTGGCTGGTTCAAACGACAGCCGGACTTCTTTGTATTTTACTTGGACGTCTCAACTCTCTCTGGAGTTCTATCCTGGTCATGTGCGCTTTCTCTGTATTTGTTCAAGCAGCTTCTGGCCTCATATTTGGTGTCGTACCTTTCGTTTCCAACAGATCGCTAGGAGTAATTTCAGGGATGACGGGGAGCGGAGGGACTATTGGGGCAGTGGTGACTCAAACGCTGTTGTTTTCAGGGGCTCACTTCTCAAAGCAAACAAGCATATCTCTAATGGGAATTATGATGGTCTTGTGCACTCTTCCTGTGAGCCTTTTGTATTTCCCTCAATGGGGAGGTATGTTCTATGGCCATTCATCAGATCCCGATTCACCTGAAGAAAGTTATCGCCTGCTTGATTAG	1629	0.5169	MYLCGRRSSPLPPSKKAAYISHLCQLPPDPTHPKVQSASNSVQVIRKIPPSSIPYFAISLPYIYYDRSNCISHSRSTTFCKHTPQFATMQPHFSPKEVDVHDRATVFHPLSLAPPHMLAFHLAWLNLFSCFFSTFAIPPLLPVIHHHHHLHLTPTDIGNAGIASFVGSIFSRLLMGPTCDLVGPRIASGTLSLLTAPVILATAFVSTAQSFIIIRFLVGFSLANFVSSQFWMSSMFSSSIVGLANGVAAGWATVGSGVTQIVMPLLYSLIINFNVPSSIAWRLAFVVPAIFQAITGILVLAFGQDLPSGKYVRAQTQKAKGENVFKVIFDGLSNYRGWVLALLYGFSFGVELTTDNIIAQYFYDRFNVNIEVAGSIAASFGMANLFSRPMGGVFSDGLGRRFGMRGRLWGLWLVQTTAGLLCILLGRLNSLWSSILVMCAFSVFVQAASGLIFGVVPFVSNRSLGVISGMTGSGGTIGAVVTQTLLFSGAHFSKQTSISLMGIMMVLCTLPVSLLYFPQWGGMFYGHSSDPDSPEESYRLLD	542

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele05g0482	542	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	119	514	IPR020846	GO:0022857
	Lele05g0482	542	FunFam	Nitrate transporter 2.1	321	522	-	-
	Lele05g0482	542	Gene3D	MFS general substrate transporter like domains	116	313	IPR036259	-
	Lele05g0482	542	SUPERFAMILY	MFS general substrate transporter	96	516	IPR036259	-
	Lele05g0482	542	FunFam	Probable high-affinity nitrate transporter 2.4	112	309	-	-
	Lele05g0482	542	CDD	MFS_NRT2_like	120	514	IPR044772	GO:0015112
	Lele05g0482	542	Pfam	Major Facilitator Superfamily	124	481	IPR011701	GO:0022857\|GO:0055085
	Lele05g0482	542	PANTHER	HIGH-AFFINITY NITRATE TRANSPORTER 2.3	97	538	IPR044772	GO:0015112
	Lele05g0482	542	Gene3D	MFS general substrate transporter like domains	322	521	IPR036259	-
	Lele05g0482	542	ProSitePatterns	Sugar transport proteins signature 1.	391	406	IPR005829	GO:0016020\|GO:0022857\|GO:0055085

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele05g0482	Lele-ChrLele05	2827825	2830445	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele05g0482	85	526	Inorganic Solute Cotransporters	AT5G14570	61.790	0.0	561