Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0478 ATGAAACATTCTTCTTCTTCTTCTTCTTCTTCATGCCTTCTCTTCATTCCCATCTCCTTCCTCTTTCTTTCTTTCTTTCCCTACCTCCCTTCTCTCCGATCCTCGAATCTCCCGGGCCGGCCTCTTCTGCGGCGCCTCCAAAGCCCCTCTCTCTTCCCATTACGTCCGCATCTTCGTCCGAGAAATGCAGGCCTCTCCCAAACTATCACCTCTCAGGACTGGGCCTCTCACTCTCTTAACCTCTCTTCACTCCCCATCTTCGGATTCGCTCAGTGCTTCCATGACCTTTCCCACACCGATTGCCTTCTCTGCTACGCCGCCAGCCGCACCAAGCTCCCTCGCTGTCTCCCCTCTCTCTCCGCCCGCATCTACCTCGACGGCTGCTTCCTTCGCTACGATAACTACAGTTTCTACTCCGAAGCCATTGATCCTGTTGGAGACACTCTGAACTGTAGCTCCAGCTATGGTGCGGCGGAGGATCAACGTAGTAAGAGGCGGGAATTTGAGAAGAGTGTCGGCGAGGTGGTTGATGATGTGGTGAGGGTTTCAGTGGGAGAGGGATTAGGGTTTGGTGTGGGAGAAGTCGGGGGAGTTTATGCTTTGGCTCAGTGCTGGAAGACACTGCGGAGTGATGAATGTGGGATTTGCTTGAGGAAAGCGGCAAGGGAAGTGAGAGGTTGCTTGCCTAAGAGGGAAGGAAGGGCATTGAATGCTGGTTGCTATTTAAGGTACTCAACTCACAAGTTCTACAACCAAGGAGGTGAAGAAGAAAAGGCTCAAAAGAGGTCATTTAGGAGGGGAGCCATCATAGCAACAGTGTTATCTGTGGCTGCAGTTTTGATGCTGTTTCTCTCTGCTTTTTATGTAGTCTTCTCAAGATTATCAAAGACGAATAAAGTAAGCAATCGTCTGGGTCAGATCTCCATTTCCATAAACAAGTCAAGTTTGAATTTCAAATACGAAACTCTGGAGAAGGCCACATATTATTTCAACTCTTCAAGAAAAATTGGGCAAGGAGGGGCTGGTTCTGTGTTCGAAGGGACTCTTCCAAACGGCAAAGTCGTGGCTGTCAAGAGATTAGTGTTTAATACGAGGCAATGGGTTGATGGGTTCTTTAACGATGTGAATTTGATTAGTGGAATTGAGCACAAGAACCTCGTCAAGCTCTTGGGTTGTAGCATTGAAGGCCCCGAGAGCCTCCTTGTCTACGAGTACCTACCCAACAAGAGCTTGGATCAATTCATTTTTGCTGTGGATCCATGCTTAGGAGATGATTTTCCAGCAGCAGAACTATCAACGGTGCTTCAAATAGGGCTGCTATGCACACAAGCTTCTGCTTCCATGAGGCCAACCATGGAAGAAGTTGTTGAGCTGTTGAGTAACTCAAATGTGGATGTTTCTGTACCAAATCAACCCCCATTTTTTAGTACTGGCGCTGGGTTGCTAAACTCAGAGAGCTCCATTAGGTCTTACGGCACAAACAGTTTCGTTTCAAATGCTTTGAAGAAGATTGAGACGTCCGAAGTATCATCCTCGGAGACCTTCAGCACTCGCAGCTTAGGGGGGCCATCAAGAAGTGAAGAACCCATAAACCAAGCTTGA 1602 0.4819 MKHSSSSSSSSCLLFIPISFLFLSFFPYLPSLRSSNLPGRPLLRRLQSPSLFPLRPHLRPRNAGLSQTITSQDWASHSLNLSSLPIFGFAQCFHDLSHTDCLLCYAASRTKLPRCLPSLSARIYLDGCFLRYDNYSFYSEAIDPVGDTLNCSSSYGAAEDQRSKRREFEKSVGEVVDDVVRVSVGEGLGFGVGEVGGVYALAQCWKTLRSDECGICLRKAAREVRGCLPKREGRALNAGCYLRYSTHKFYNQGGEEEKAQKRSFRRGAIIATVLSVAAVLMLFLSAFYVVFSRLSKTNKVSNRLGQISISINKSSLNFKYETLEKATYYFNSSRKIGQGGAGSVFEGTLPNGKVVAVKRLVFNTRQWVDGFFNDVNLISGIEHKNLVKLLGCSIEGPESLLVYEYLPNKSLDQFIFAVDPCLGDDFPAAELSTVLQIGLLCTQASASMRPTMEEVVELLSNSNVDVSVPNQPPFFSTGAGLLNSESSIRSYGTNSFVSNALKKIETSEVSSSETFSTRSLGGPSRSEEPINQA 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0478 533 Pfam Protein tyrosine and serine/threonine kinase 332 416 IPR001245 GO:0004672|GO:0006468
Lele05g0478 533 Gene3D - 152 249 IPR038408 -
Lele05g0478 533 Gene3D - 60 137 IPR038408 -
Lele05g0478 533 FunFam Cysteine-rich receptor-like protein kinase 2 295 405 - -
Lele05g0478 533 ProSiteProfiles Protein kinase domain profile. 330 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g0478 533 SUPERFAMILY Protein kinase-like (PK-like) 306 419 IPR011009 -
Lele05g0478 533 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 418 484 - -
Lele05g0478 533 FunFam Cysteine-rich receptor-like protein kinase 42 63 137 - -
Lele05g0478 533 MobiDBLite consensus disorder prediction 506 533 - -
Lele05g0478 533 FunFam Cysteine-rich receptor-like protein kinase 3 152 249 - -
Lele05g0478 533 ProSiteProfiles Gnk2-homologous domain profile. 150 249 IPR002902 -
Lele05g0478 533 Pfam Salt stress response/antifungal 83 135 IPR002902 -
Lele05g0478 533 Pfam Salt stress response/antifungal 161 246 IPR002902 -
Lele05g0478 533 Gene3D Phosphorylase Kinase; domain 1 290 405 - -
Lele05g0478 533 ProSiteProfiles Gnk2-homologous domain profile. 36 137 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0478 Lele-ChrLele05 2764020 2766602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0478 21 416 Receptor kinase-like Gene Family AT5G40380 52.239 1.90e-132 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele05g0478 PK_Tyr_Ser-Thr 2.1e-10 CL0016