Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0475 ATGGATTTTCAGCCAAACTTTCATGAGAGATTTTCTCTGCTTTCTGGGCTTTTCCCGGAAAATCTCCCAAAGTCTCAGCCCCTACCGCTCTCAATGTCACAGATTCAACCTTCGCCTTCCCAGGTTAATCCGCCACTGATGTTCCCCACCGACCAAAATTTCCACCATTTTCAACCCTACCCTCAGCTGGATCTGAACGGGTCAAACCCAAACCCGATTTTTCTGAAGGATGCTCCATCTTCTTCCTTCAATATCCCTTTTTCTCATCCGACGACTCTCCCTTTCGATTCTGCCTTACCAAACGAGCCCTTCAAAATCGACGCCGCCTTGCATGGCGGCCACAGTACTGGTCGGGCCTTCTGGGATTTCTCCAACAAGCTCTCTCTTCCATCTGATTCTGTCTTGGCCCCACACATGGGCCCATCCCTGTCACCATTGTTCCATCAAGCTTATGGATCACCACCGAAGCCTAAGCTTCAGGACGAACTTTTTCTGTTTTTCCCTGAGAATAATAATCATTGGGAACATGAAGCTCGAGCTGATCAGAGGGACGATGACAGGAACAAGAAGCTGCAGATGCGCAAAGGTGGTGGTATTCTGAAGAACACCAATATCATCAAAGGCCAATGGACACCAGAAGAGGACAGAATGTTGGTGCAATTGGTGGAGCGGTTTGGGATGAAAAAATGGTCGCAAGTCGCAAAGGCTTTGAATGGAAGGGTGGGAAAGCAGTGTAGGGAGAGGTGGCACAATCATCTGCGTCCGGATATTAGGAAGGAGGCATGGACGGAGGAAGAAGACATGATCCTGATCGAAGCCCACAAGGAAGTTGGCAACAAGTGGGCGGAAATCGCTCGGAGGCTTCCCGGAAGAACGGAAAACACCATCAAGAACCACTGGAACGCCACAAAGCGTCGCCAGAACGCCAAGAGACACAGAAACAAGGGACCCACATCGAGGCCTTCGCTTCTTCAGGAATACATCAAGCGAGTCACTTCAGGCCAAGGAACCTCAAGGCTGCCGCAGATCAAACAGGAGCGAGCCTACAACGATGACGACGAAGACGACGAGCTGGTCTACTACAACAACAATCGCATGAACAACGTCAGAGTTCGCTACGAAAGCGCCTCGGACGACGACGATGGCACCAGCTCTGGGGATTGGGAGGTTGAGATGTACGAGCCGTCGGAGGGAGAAGCCGGCGCCGACGAGGATGATCAGGAGACGGCGTATGAGAATAATAATGGAGATGAAGAGGTTGCGGCAGAGATGAACGTATTTGTTGGAGAGGAGGGGATGAAGAAAGAGATGGATCTGATGGAGATGATATGTGGTCCCAGCAGCAAGTACTGA 1353 0.5085 MDFQPNFHERFSLLSGLFPENLPKSQPLPLSMSQIQPSPSQVNPPLMFPTDQNFHHFQPYPQLDLNGSNPNPIFLKDAPSSSFNIPFSHPTTLPFDSALPNEPFKIDAALHGGHSTGRAFWDFSNKLSLPSDSVLAPHMGPSLSPLFHQAYGSPPKPKLQDELFLFFPENNNHWEHEARADQRDDDRNKKLQMRKGGGILKNTNIIKGQWTPEEDRMLVQLVERFGMKKWSQVAKALNGRVGKQCRERWHNHLRPDIRKEAWTEEEDMILIEAHKEVGNKWAEIARRLPGRTENTIKNHWNATKRRQNAKRHRNKGPTSRPSLLQEYIKRVTSGQGTSRLPQIKQERAYNDDDEDDELVYYNNNRMNNVRVRYESASDDDDGTSSGDWEVEMYEPSEGEAGADEDDQETAYENNNGDEEVAAEMNVFVGEEGMKKEMDLMEMICGPSSKY 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0475 450 FunFam Transcription factor MYB119 260 324 - -
Lele05g0475 450 Pfam Myb-like DNA-binding domain 210 267 - -
Lele05g0475 450 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 202 257 IPR017930 -
Lele05g0475 450 PANTHER MYB PROTEIN-RELATED 180 322 - -
Lele05g0475 450 MobiDBLite consensus disorder prediction 318 344 - -
Lele05g0475 450 CDD SANT 261 304 IPR001005 -
Lele05g0475 450 CDD SANT 210 253 IPR001005 -
Lele05g0475 450 MobiDBLite consensus disorder prediction 374 419 - -
Lele05g0475 450 MobiDBLite consensus disorder prediction 303 317 - -
Lele05g0475 450 SUPERFAMILY Homeodomain-like 204 300 IPR009057 -
Lele05g0475 450 FunFam Transcriptional activator Myb isoform A 206 259 - -
Lele05g0475 450 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 258 308 IPR017930 -
Lele05g0475 450 MobiDBLite consensus disorder prediction 302 354 - -
Lele05g0475 450 Gene3D - 206 258 - -
Lele05g0475 450 SMART sant 206 255 IPR001005 -
Lele05g0475 450 SMART sant 258 306 IPR001005 -
Lele05g0475 450 ProSiteProfiles Myb-like domain profile. 254 304 IPR001005 -
Lele05g0475 450 MobiDBLite consensus disorder prediction 380 413 - -
Lele05g0475 450 Gene3D - 260 326 - -
Lele05g0475 450 ProSiteProfiles Myb-like domain profile. 202 253 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0475 Lele-ChrLele05 2733069 2735129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0475 201 355 MYB Transcription Factor Family AT4G18770 63.694 1.68e-64 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele05g0475 Myb_DNA-bind_6 3.5e-19 CL0123