Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0452 ATGCACAAACAAAGCATTTACCATGAAATTCATATTAAAGCCACGTTTGTTGCACAGAAGTCAGAGAAAACAGCGAGAGAAGATATTCTAATTGAAAGAATGGACCCCATGATGAGGAATATGGATCATAACGAATGTTCAAAGCCAGCAATACTATTAAAAGTGAACAGGTGTGCGGCATGCTTTAGGCAGTTCAACAGGTTGGAGCACTTAGTGGAGCACATGAGGATCTCATATCATTCGGTTCACGAACCCACCTGTCCATTGCCAAAACAGGAATGCAGAGATATTTTTTCCAGCCGAGGATGCAAGTTTTGCTTGAAGGGACTAGTTGGACGTTTTTCAAACCTGGGGATTCGTGATAATTTGACAATTGGAAAAGGGCCACAAGTTGTTGCCCTTGCTTGCAAAATGGTGGGAGGTGGCAGTGATGGCTCACTTGATCTGTGTGCAAGAGTCTGCATAATAGATGAACACGAAAACATCATATTCCATTCTTACGTGAAACCTCCAATTCCTGTCACAAACTACAGGTATGAGACAACGGGTATTCGACCAGAATACTTGAGGGATGCAATGACGATGAGGCAAGTGCAGAGGAAGGTTCAAGACTTCCTCTGCAATGGAGAACCCATGTGGAAGATTCGACCAAAGTGTGGGAGAGCCAGGATTCTTGTAGGTCATGGGTTAGATCATGACCTGGATGCTCTGCAAGTGGAATATCGGGCAGAAATGATGAGGGACACTGAAAAATACCCTCCATTGATGAAGACGAGCAAGCTGAGCAACTCACTCAAGTATGAGATCCAGACAGGGATACAGGATCCATATGAGGATTGTGTGGCAACGATGAGGCTGTACATGAGGATGAGATTCCAAGACCACAAAAAAGAGGATCATCCTTTGGCCTCAGAGCCACAAAATAAGAACAACTTTGCTTCATGGAGACAAAGAGAGCTTGAGAGAATGAACCCAGATCAAATGCTTGTGATCTCCAGGTCTGACTACTACTGCTGGTGCCTTGACTCCATCTAA 1035 0.4425 MHKQSIYHEIHIKATFVAQKSEKTAREDILIERMDPMMRNMDHNECSKPAILLKVNRCAACFRQFNRLEHLVEHMRISYHSVHEPTCPLPKQECRDIFSSRGCKFCLKGLVGRFSNLGIRDNLTIGKGPQVVALACKMVGGGSDGSLDLCARVCIIDEHENIIFHSYVKPPIPVTNYRYETTGIRPEYLRDAMTMRQVQRKVQDFLCNGEPMWKIRPKCGRARILVGHGLDHDLDALQVEYRAEMMRDTEKYPPLMKTSKLSNSLKYEIQTGIQDPYEDCVATMRLYMRMRFQDHKKEDHPLASEPQNKNNFASWRQRELERMNPDQMLVISRSDYYCWCLDSI 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0452 344 ProSitePatterns Zinc finger C2H2 type domain signature. 58 80 IPR013087 -
Lele05g0452 344 CDD REX4_like 132 287 IPR037431 GO:0006364|GO:0008408
Lele05g0452 344 FunFam RNA exonuclease 4 127 306 - -
Lele05g0452 344 ProSiteProfiles Zinc finger C2H2 type domain profile. 56 85 IPR013087 -
Lele05g0452 344 Pfam Exonuclease 148 258 IPR013520 -
Lele05g0452 344 Gene3D - 128 311 IPR036397 GO:0003676
Lele05g0452 344 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 102 337 - -
Lele05g0452 344 SUPERFAMILY Ribonuclease H-like 144 292 IPR012337 -
Lele05g0452 344 SMART exoiiiendus 130 296 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0452 Lele-ChrLele05 2581620 2583968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0452 56 344 C2H2 Transcription Factor Family AT5G40310 62.865 1.07e-158 447