Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0442 ATGGAGGAAAGCCCAAAGAAACGACTATTTTTCAGCTCACCTGAGGAACTGTTTGACGAGGAATATTACGATGAGCAGTTGCCGGAGAAGAAGCGACGCCTCACTCCCGAGCAGGTGCTTCTGCTGGAGAAAAGCTTTGAAGAAGAGAACAAGCTGGAGCCGGAACGGAAGACCCAGCTGGCCAAGAAGCTGGGATTGATTCCAAGGCAGGTGGCTGTGTGGTTCCAGAACCGCAGGGCTCGTTGGAAAAGCAAGCAACTTGAAAGGGATTACGATGTTCTCAAGTCTTCCTACGATGCCCTTCTTTCAAAGTACGACTCCATTGTCAAGGACAATGAAAAACTCAAATCAGAGGTGGTAGCCTTAAGCGAGAAGCTTCTAGATAAAGAGGTGCAACGAGAACCATTACCAGAAGAAAAAGCTGACCCACTTATAATGGAACTAGCCCAAATTTCAACCCTGCCATTCAACGTGAAGGTGGAGGACCGACTCAGCGGTGGGAGTGGTGGGAGTGCGGTGGTGGACGAGGATGCTCCACGGCTTGTTGTGCACAGCGTTGATTCCTACTTTCCAGCTGAGAACTTTGATGTATGCATCGCCAGAGTCGATAGGGTTCAGTCAGAGGAGGAGGATGGCAGCGACGATGGTCGGAGTTACTTCTCTGATGTGTTTGTGGCCCCTGAACCTGAGCACCAAAACCATGAGGAGGGAGAGGCGTTGAGTTGGTGGGCGTGTGTTGTGCATAATGAGGAAGAACACTGTAAGAAGAGTCTATTGGTTGTTAGAGATGATGTGGGATGTGGGCGTCCAAGAAAACTTGAACGTCCGTCCGTTTTAGACAACCGACAAGCTGTTAACTTTGATAAAACAGATGCATTGATGCTGTGGGGATGGATGGTTAAACCTGTGACATCTAAAACTAGCGCAACGAATGTTCTTGTTTCCATCCCAGACGAAGGCCTGGCAGGGATGTCAGAGAAAGCTCTTAGTGATAACAATACAACTCCTGAAACTGAAAGGAAGGTGGAGAGCTCCAGTAAGGCATGTTCAAATGTAGCTTCTGTTGACGATGCAGATGAAAATATTAAAGATCGGCAGAAGAAAAAAAATTGTGCTTCCATAGTGCCTCCATCTGTCAATGGTAATCATTCAGGCGATTCTCAAATAGAAATAGTAAATGCAGAAGTAGAATACATAAATTCTGAGAACTTGAGGGATTTAGAAGATATTGACAATTGCCTCAAGACTCTTTTGGCTGTATTGGACTCCAAGGACTGGGTCATGGTATGCAATGCCCTCAATAATGTACGGCAGATTTCAATATTTCACAAGGAAGCACTGCTTGATATTCTGGGCGATGTGATAACATTTGTTGTGAAGTCCCTGAAAAGCCCTAGAAGCGCTGTATGCAAAACTGCCATTATGACATCTGCAGACATTTTCAGTGCATATAATGATCTTGTAATAGATTTTCTGGACCCCCTGCTGGTGCAGCTTCTTCTCAAATCTTCACAGGACAAGCGCTTTGTATGTGACGCAGCTGAGAAAGCATTAATAGCTATGACTACCTGGATTTCCGCTACGTCTTTGTTGCCAAAATTACAACCTCATCTTAAGAATAGGAATCCCCGAATCCGTGCAAAGGCTTCAATGTGCTTTTCTCGAAGTGTCCCTCGATTGGGAGCTGAGGGCATAAAGGCTTATGGGATTGACAAATTGATCCGAGTAGCTGCTTCCCAGCTAAGTGACCAGCTCCCTGAATCCAGGGAGGCAGCCCGAACTCTGCTACTAGAGCTTCAAAATGTGTACGAGAAATTTCATGATCCCATGCCTGCTTCTGTTTCTGAGCAACCAGAGCCGGGTTCATGGGAGAACTTCTGTCAATCAAAACTTTCACCGCTAAGTGCTCAAGCCGTACTTCGCGTTACCAGTATTGCTCGGGAGGGTCTTGTTTCATGA 1959 0.463 MEESPKKRLFFSSPEELFDEEYYDEQLPEKKRRLTPEQVLLLEKSFEEENKLEPERKTQLAKKLGLIPRQVAVWFQNRRARWKSKQLERDYDVLKSSYDALLSKYDSIVKDNEKLKSEVVALSEKLLDKEVQREPLPEEKADPLIMELAQISTLPFNVKVEDRLSGGSGGSAVVDEDAPRLVVHSVDSYFPAENFDVCIARVDRVQSEEEDGSDDGRSYFSDVFVAPEPEHQNHEEGEALSWWACVVHNEEEHCKKSLLVVRDDVGCGRPRKLERPSVLDNRQAVNFDKTDALMLWGWMVKPVTSKTSATNVLVSIPDEGLAGMSEKALSDNNTTPETERKVESSSKACSNVASVDDADENIKDRQKKKNCASIVPPSVNGNHSGDSQIEIVNAEVEYINSENLRDLEDIDNCLKTLLAVLDSKDWVMVCNALNNVRQISIFHKEALLDILGDVITFVVKSLKSPRSAVCKTAIMTSADIFSAYNDLVIDFLDPLLVQLLLKSSQDKRFVCDAAEKALIAMTTWISATSLLPKLQPHLKNRNPRIRAKASMCFSRSVPRLGAEGIKAYGIDKLIRVAASQLSDQLPESREAARTLLLELQNVYEKFHDPMPASVSEQPEPGSWENFCQSKLSPLSAQAVLRVTSIAREGLVS 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0442 652 SMART HOX_1 28 89 IPR001356 GO:0003677
Lele05g0442 652 Coils Coil 84 132 - -
Lele05g0442 652 FunFam homeobox-leucine zipper protein ATHB-6-like 33 79 - -
Lele05g0442 652 Gene3D - 386 617 IPR011989 -
Lele05g0442 652 Pfam Homeodomain 30 83 IPR001356 GO:0003677
Lele05g0442 652 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 23 206 IPR045224 GO:0003700
Lele05g0442 652 SUPERFAMILY Homeodomain-like 30 96 IPR009057 -
Lele05g0442 652 SUPERFAMILY ARM repeat 401 607 IPR016024 -
Lele05g0442 652 ProSitePatterns 'Homeobox' domain signature. 60 83 IPR017970 GO:0000981|GO:0006355
Lele05g0442 652 MobiDBLite consensus disorder prediction 324 348 - -
Lele05g0442 652 PRINTS Lambda-repressor HTH signature 65 81 IPR000047 GO:0003677
Lele05g0442 652 PRINTS Lambda-repressor HTH signature 56 65 IPR000047 GO:0003677
Lele05g0442 652 Pfam Homeobox associated leucine zipper 85 126 IPR003106 GO:0006355|GO:0043565
Lele05g0442 652 CDD homeodomain 30 86 IPR001356 GO:0003677
Lele05g0442 652 ProSiteProfiles 'Homeobox' domain profile. 25 85 IPR001356 GO:0003677
Lele05g0442 652 SMART TOG_3 403 631 IPR034085 -
Lele05g0442 652 Gene3D - 24 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0442 Lele-ChrLele05 2503955 2511416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0442 1 244 Homeobox Transcription Factor Family AT3G01470 60.000 4.21e-78 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele05g0442 CLASP_N 7.8e-07 CL0020