Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0433 ATGTCACAAGGTTACGCTATCGAGCTCTACTTCGATCCTGCGCTAGAAAACCAGGTGTTGAAGGCCTGGAATGTACTGGCTCGCCGACAAATCAGCACCCATCTCATCGAAATCGAGTCTCGCCCGCACATCACTCTCTTTTCCAGCTCCTTTGTTGATTCCGCCAAGCTTGAATCAGTGGTCAAGAGTTTCGCTGCCAAGCAGGAACCCTTGCCTCTATCTTTCTCAACAATCGGGTGTCTACCGAACGACAATAATGTACTCTTTCTTGCACCGACCCCTTCAATCTGGCTGCTTCAGTTCCAATCGCAGTTGTGCGATGCAATGAAGAAAGAAGGTTTCGAGATAGGAGATGATTATCGCCCAGATTCTTGGATTCCTTACTGCGCGGTTGCTCAGGAAGTGCCGAAAATTAGGATGGCCGAGGCGGTTTGTGTCTTGCGGGACTTGAAATTGCCGGTTTCTGGGTATGCCATGGATATTGGTCTGGTGGAGTTATCTCCCACTCGCGAACTCTTCTCATTTGTGCTTGGTAATTCAGGCAATGATATTTCTTCTATTAGCAAAACCATTGTAGCGGATGTTTGTGAATCATGTCACTGGAGACTGGGCCAATGGGAGTGA 624 0.4824 MSQGYAIELYFDPALENQVLKAWNVLARRQISTHLIEIESRPHITLFSSSFVDSAKLESVVKSFAAKQEPLPLSFSTIGCLPNDNNVLFLAPTPSIWLLQFQSQLCDAMKKEGFEIGDDYRPDSWIPYCAVAQEVPKIRMAEAVCVLRDLKLPVSGYAMDIGLVELSPTRELFSFVLGNSGNDISSISKTIVADVCESCHWRLGQWE 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0433 207 Pfam 2'-5' RNA ligase superfamily 41 158 - -
Lele05g0433 207 PANTHER - 1 180 - -
Lele05g0433 207 Gene3D Cyclic phosphodiesterase 5 178 - -
Lele05g0433 207 SUPERFAMILY LigT-like 4 133 IPR009097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0433 Lele-ChrLele05 2461140 2462358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0433 1 180 Calmodulin-binding Proteins AT5G40190 72.778 1.65e-91 264