Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0431 ATGGATGGGCGTTTGCATAAGCTGTCTGAGATCAGGGAAGATGCAAACGATGTCGTATGGGTGGTGATAAAAACGACGCCGTGGGCATTGTCCCCATCAAGCATTACCTTGGTGGAAGTGGAACTGGCAAATTTCTTGGCCCCAAAACCATTTTTTCTCTCTAATTCGCCGATTCGGGAGTGCATCGACCTCTCAACCTCTTTCGTCCTTCCCCCATCGCTACTTGTTCGGACAAAATCTCTGGATTTCGCCACTACCAGTTACTTTTTATCGATCTCAATGACACGAAATCGTGCCTTTTTCTCTTTGGGTTTCTCGTCGGGTCAAGAAGGTGGAATTCGATTGGAATTGATGTTTCTTTTCAAGGATGAAGTTGGGATCGATTCAGTATTCAAGGGACATGGAGGGCTATGCATGTGTCGGGAGGATGGACGTAAGATCCGTCTTGGTGATTGTGCACTTTTCAAGCCACCCCAAGATTCCCCACCTTTTATAGGAAGAATTCGCAAATTAACATTGAAGAAAGAAGAAAGTCCGAGTTTAGAAGTGAATTGGCTTTACAGACCTGCTGATCTGAAGCTTGCAAAAGGGATCCAATTGGAAGCTGCACCAAACGAGGTCTTTTACTCCTTTCACAAGGATGAAACACCTGCTGCATCATTACTCCATCCGTGTAAAGTTGCATTCCTTCGTAAAGGTGTTGAACTTCCTTCAGGGATATCCGCATTTGTCTGTAGACGAGTGTATGACATTGAGAGTGAGCGTTTATGGTGGCTAACTGATAAAAATTACATTAATGTAAGTCTTCTGATATTTCTATTTCCCTACATCATAATTGTGTATAATAGCTTCATTGATAAGCTTGTGAACTTTAAATGGATGCAGGAACGACAAGAAGAAGTTGACCAGCTATTAGATAAGACAAGACTAGAAATGCATGGGGCAGTGCAGTCAGGAGGCCGTTCTCCAAAACCCTTGAATGGTCCGACATCAACACCTTCACTTAAATCTGGTTCAGATAGTGTTCAAAATAGTTCTTCCTTTGGTTCACAGGGTAAGGGAAAGAAGAGAGAACGGGGTGATCAGGGACCTGATTCATCTAAAAGGGAACGGTTAATCAAAACAGAAGATGGGGATACTGGTCAACATAGGCCAGAAAACTTTTTAAAGTCTGAGATTACTAAAATTACTGACAGCGGTGGTCTTGTGGACTTTGAGGGAGTAGAAAGACTGGTACAGCTCATGCAACCTGACAGTACTGATAAAAGAATAGATTTGGCTGGGCGAATAATGTTAGCTGATGTAATAGCAGTCACAGATCGTTTTGACTGTCTTGGATGGTTTGTACAGCTCAGGGGTCTGCCTGTATTGGATGAATGGCTCCAGGAGGTCCATAAGGGGAAAATTGGTGATGGTAATATGCCTAAAGAAAGCGACAAGTCTGTTGAAGAATTGCTGTTAGCTTTACTTCGTGCATTGGATAAGCTTCCAGTGAACCTTCATGCTTTACAGACATGTAATGTTGGAAAGTCTGTGAATCATTTGCGTACTCACAAGAATTCTGAAATTCAAAAGAAAGCTAGGAGTTTAGTTGACACTTGGAAGAAACGTGTTGAGGCTGAAATGAATATTAGCGATTCAAAATCTGGATCTAGCCGGGGTGTTTCTTGGCCAGCAAAGCCTGCATCTTCTGAGGTGTCTCTTGTTGGAAGTCGGAAAGCAGGTGGATCTGCTGAGGTAGCTGCAAAGACCTCTACAATGCTACCATCTGCGTCCAAAAACTCTCAGGCTAAGATTAGCTCAGGAGAATCACTGTCCAAGCTCTCGCCATCTTCCGCATCAACTAAAGCTACTATGACCTCAGTAGCCTGTAATTCAAAGGAGCAAAACATTAAAGCTGGCGCTGGAACATCAGATTTACCCTTGACACCTATTAAGGAGGAAAGGAGCAGCAGTTCTAGTCAGTCTCAAAACAACAGCTTATCTTGTTCTAGTGAACAAGCAAAAACTATTGGTTCTTGTAGGGAAGATGCAAGGAGCTCCACTGCTGTATCAATGAGTGTGGGCAAAATGCATTGCAGTGCATCTCGCCCCCGGAAATCAAGCAATGGTCTGCATGGGTCCACTTTAACTTCAGTTCAGAAGGAGCCCCATTCTGGAAAAAACTTGAGTAGAAACTCAGCCTCGGAGAAGGTTTCACCGAATCAACCAGCCCATGAAAAATCACCTGACGTGCCCCTTCCTGATCATGGAAGTAATCAGAGACTGATTGTTAGGTTGCCAAATGCTGGCCGAAGTCCTGCCAGGGGAGCTGGTGGGGGCGGGGAAGATCCTGCTATTCTGCTTGGCAAAGCATCACCTCCAGGAGACAAGCAGGAGAATGTGGATAGAAGAGTGAAATCAAAAACTGATGGTTCTAAGAATAATAATGTCTCGAATATGGCCACTGATGTTTGTGATGCTAGCGAAGCTGTGGCTGATTATGAGGAAGGTAATGGCTCACCAACTGGTGAAGGATGCAGGGCCGGTGAAGATAGTGATAAGCTCACGGAAACATCCAAATCAACTAGTTCATCAGGATTTCTTTCCAGATCAGGGACTTATGATGCTTCCATGAGCTCCATAAATGCATTAATTGAAAGTTGTGTGAAATTTTCAGAAGCAAGTCCCTCTGTGTTCCCTGTAGATGATGCGGGGATGAACCTACTTGCTACTGTAGCTGCTGGAGAAATATCTAGGTCAGAAAATGTGACGCCAGCAGTTTCTCCTGGGAGGATGTCTCCTGCAGCAGATGAATCATCCTCAGGCAATGATAGTAAGTTACAACATTCAGGTGAAGCAGTTGCTTGCACTCTTGAACATTTGAAGGATGGAGCTACTGAAGATCATGTAAATGTCACTGATCCTTCACAGCTCAAGAATGATGCAAGACATACCGTAGGATCAAGATCATGTGATCTGTCTGGAGATGGTGAAACTACACGATCTAGTTGCAAAGAGAAAACTGGTGATGGTAAAAATCAAATGAATTCTTCCCCTACAGATTTGTCGCATATTGTGGAAGGTCCATTCTTAGGGCTTGAAATCAAAGAGGAAGCTTCTGAAATATTATTGCCCACTAAAAAGGAGAATGTTGCAGAGCCTGAGGGAGTTAGTCCGCTTCATGAGCAGAGGAAATTGGAAACTCGTTGGGCTAAGAGCAGCAACAATTCAGACTCTAAAACAAAAACAAGAACTTCTATTGATGAAGACCGGAAGGTTGATCATGTTAATGAGAATAAGATGGAGAATGAAGTTTCAGTTTGTGAAGGGCCTCATGTAAGTCTCAAAATAGAGAAGGAAGTGTGTGAAAAATCACCTGAATCATCTACAGGTTTGGGTAATGAAGACCAGATTAGTGGTGAGAAAGTTGCAGGTAGTGTCATCTCATTGCAAAAGCCCACTCCTCTGGCAGAAAACTGTATTGATGGCAGAAATGATAATGTTGTGGTACCACCTTCTGCTCCGAGTAATCATTTGATGGAATGTAAGGCTGTGAGTGCTGTTGACGTGAAACCATGTGAGTTGGAGCATAGTAAGGAAAGACAAAGGGATCTGGACTCATCAGGGCCTGCTGTCAACAACCAATGTACTGCAGAGAATTTGGAGAGAAAAGAGGTTCTTGGTCTGGGCACTGATACACCAGCAAAGTCTGAGTCTCCTAAAAATTATGTACCAGAGAATGAAGTGCTAAAAAAGCCTTCTGGGTTTAATTTGGACAGAGTTGTGTCTGATGGTGCAGCAGAACAACATGCCTCTGGTGTTAATGATTCACTTGCTGCCAGAGAGTCGGATATAGCAGTGAAGCTGGACTTTGATTTAAATGAGGGATTTCCTGTTGATGATGTGAATCAAGGGGATGTTGTGAGACAGGAAGAACCTATCACATCATCTGCAGTCCACGTTCCATGCCCTTTGCCTTTTCCTATTTCTTCTATGTCTGGGGGCTTCCATGCTTCAATTACTGTGGCTTCTGCTGCCAAAGGGCCTGTTATTCCACCAGAGAACCCGATGCGGAGTAAGGGGGAACTTAGGTGGAAAGGATCAGCTGCTACCAGTGCATTCCGTCCAGCTGAGCCCAGGAAAAACACAGAGCAGCCACTAAATACAAGTGATAATAGTGCTACCAAGCAAGGTCGTGCTCCGCTGGATTTTGATTTGAATGTGCCTGATCAAAGAAGTTTTGACGATGTGGCTTCCCATGGCTCTTCAGAGGCTTGTTTAGAATCCTTGCCTCGTGACCGTGGGACTGCAGGACTTGATCTTGATTTAAACAGAGTTGACGAGACTCCTGATTCTGGCTGTTTTTCTGTGACCAAACTGGATATTCCTTCTGTGCCAACTAAACCTTCATTATCTGGTGGATTATCCAGTAGTGGAACTGTATCAAGAGACTTTGATTTAAATAATGGGCCAGGCCTTGATGAAGTTGGCACCGAAGCCCCAGCACGTAGCCAGCAGATAAAAAGTACTGTACCAATGTCTTCGACTGTTCATGGTGTAAGAACAAATAATGCTGATTTTGGGAATTATTCATCATGGTTTCCTTCAGGCACCTATTCTGCAATCAATGTGCCACCACTTCTACCTGGTAGAGGAGAACAGAGCTTTGTTGCTGGTACTGGAGCACAGCGAATTTTGGGTCCTCCTGGTAGCACTTCTTTTGGTCCTGAAATCTATAGAGGGGCAGTTCTTTCATCCTCTCCAGCTGTTGGTTATCCTCCTAGTACACCATTTCAGTACCCAGGATTTCCTTTTGAAACCAATTTTCATTTGTCTTCAAATTCCTTTTCTGGCTGTTCAACACCCTTCATGGACTCCTCCTCAACAGCAGGTGGACTTTGCTTTCCTACCATGCCCTCACAGCTAGTTGGGCCTGGTGGTGTTGTGCCATCCAATTTTCCCGGTCCTTATGTTATGAGCCTCCCAGGTGGTACAAGTAATGTGATGCCTGAAAGTAGAAAATGGGGAGGTCAAAGTCTGGATCTTAATTCAGGCCCTGGTGGTGCAGATGTAGAACGGAGAGACGATAGATTGCCTTCAGGCCTGGAACAAGATTGCAGCTGTGCCTCGTCATTTCTGACTGACAAAGGGATATGGGCCTCTGATGCAGTTGGTGTTGAAATAATGTGA 5172 0.4424 MDGRLHKLSEIREDANDVVWVVIKTTPWALSPSSITLVEVELANFLAPKPFFLSNSPIRECIDLSTSFVLPPSLLVRTKSLDFATTSYFLSISMTRNRAFFSLGFSSGQEGGIRLELMFLFKDEVGIDSVFKGHGGLCMCREDGRKIRLGDCALFKPPQDSPPFIGRIRKLTLKKEESPSLEVNWLYRPADLKLAKGIQLEAAPNEVFYSFHKDETPAASLLHPCKVAFLRKGVELPSGISAFVCRRVYDIESERLWWLTDKNYINVSLLIFLFPYIIIVYNSFIDKLVNFKWMQERQEEVDQLLDKTRLEMHGAVQSGGRSPKPLNGPTSTPSLKSGSDSVQNSSSFGSQGKGKKRERGDQGPDSSKRERLIKTEDGDTGQHRPENFLKSEITKITDSGGLVDFEGVERLVQLMQPDSTDKRIDLAGRIMLADVIAVTDRFDCLGWFVQLRGLPVLDEWLQEVHKGKIGDGNMPKESDKSVEELLLALLRALDKLPVNLHALQTCNVGKSVNHLRTHKNSEIQKKARSLVDTWKKRVEAEMNISDSKSGSSRGVSWPAKPASSEVSLVGSRKAGGSAEVAAKTSTMLPSASKNSQAKISSGESLSKLSPSSASTKATMTSVACNSKEQNIKAGAGTSDLPLTPIKEERSSSSSQSQNNSLSCSSEQAKTIGSCREDARSSTAVSMSVGKMHCSASRPRKSSNGLHGSTLTSVQKEPHSGKNLSRNSASEKVSPNQPAHEKSPDVPLPDHGSNQRLIVRLPNAGRSPARGAGGGGEDPAILLGKASPPGDKQENVDRRVKSKTDGSKNNNVSNMATDVCDASEAVADYEEGNGSPTGEGCRAGEDSDKLTETSKSTSSSGFLSRSGTYDASMSSINALIESCVKFSEASPSVFPVDDAGMNLLATVAAGEISRSENVTPAVSPGRMSPAADESSSGNDSKLQHSGEAVACTLEHLKDGATEDHVNVTDPSQLKNDARHTVGSRSCDLSGDGETTRSSCKEKTGDGKNQMNSSPTDLSHIVEGPFLGLEIKEEASEILLPTKKENVAEPEGVSPLHEQRKLETRWAKSSNNSDSKTKTRTSIDEDRKVDHVNENKMENEVSVCEGPHVSLKIEKEVCEKSPESSTGLGNEDQISGEKVAGSVISLQKPTPLAENCIDGRNDNVVVPPSAPSNHLMECKAVSAVDVKPCELEHSKERQRDLDSSGPAVNNQCTAENLERKEVLGLGTDTPAKSESPKNYVPENEVLKKPSGFNLDRVVSDGAAEQHASGVNDSLAARESDIAVKLDFDLNEGFPVDDVNQGDVVRQEEPITSSAVHVPCPLPFPISSMSGGFHASITVASAAKGPVIPPENPMRSKGELRWKGSAATSAFRPAEPRKNTEQPLNTSDNSATKQGRAPLDFDLNVPDQRSFDDVASHGSSEACLESLPRDRGTAGLDLDLNRVDETPDSGCFSVTKLDIPSVPTKPSLSGGLSSSGTVSRDFDLNNGPGLDEVGTEAPARSQQIKSTVPMSSTVHGVRTNNADFGNYSSWFPSGTYSAINVPPLLPGRGEQSFVAGTGAQRILGPPGSTSFGPEIYRGAVLSSSPAVGYPPSTPFQYPGFPFETNFHLSSNSFSGCSTPFMDSSSTAGGLCFPTMPSQLVGPGGVVPSNFPGPYVMSLPGGTSNVMPESRKWGGQSLDLNSGPGGADVERRDDRLPSGLEQDCSCASSFLTDKGIWASDAVGVEIM 1723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0431 1723 ProSiteProfiles TFIIS N-terminal domain profile. 455 541 IPR017923 -
Lele05g0431 1723 MobiDBLite consensus disorder prediction 914 943 - -
Lele05g0431 1723 MobiDBLite consensus disorder prediction 1193 1213 - -
Lele05g0431 1723 MobiDBLite consensus disorder prediction 960 1018 - -
Lele05g0431 1723 MobiDBLite consensus disorder prediction 1048 1065 - -
Lele05g0431 1723 MobiDBLite consensus disorder prediction 544 613 - -
Lele05g0431 1723 SMART BAH_4 145 260 IPR001025 GO:0003682
Lele05g0431 1723 MobiDBLite consensus disorder prediction 644 664 - -
Lele05g0431 1723 CDD TFIIS_I 494 539 - -
Lele05g0431 1723 MobiDBLite consensus disorder prediction 1376 1391 - -
Lele05g0431 1723 MobiDBLite consensus disorder prediction 352 388 - -
Lele05g0431 1723 MobiDBLite consensus disorder prediction 1040 1083 - -
Lele05g0431 1723 Pfam TFIIS helical bundle-like domain 489 538 IPR017923 -
Lele05g0431 1723 MobiDBLite consensus disorder prediction 313 388 - -
Lele05g0431 1723 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 443 552 IPR035441 -
Lele05g0431 1723 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 140 1708 - -
Lele05g0431 1723 ProSiteProfiles BAH domain profile. 145 260 IPR001025 GO:0003682
Lele05g0431 1723 MobiDBLite consensus disorder prediction 852 866 - -
Lele05g0431 1723 MobiDBLite consensus disorder prediction 1345 1432 - -
Lele05g0431 1723 MobiDBLite consensus disorder prediction 964 978 - -
Lele05g0431 1723 Gene3D - 139 378 IPR043151 -
Lele05g0431 1723 SMART TFS2_5 461 540 IPR003617 GO:0005634
Lele05g0431 1723 MobiDBLite consensus disorder prediction 682 866 - -
Lele05g0431 1723 MobiDBLite consensus disorder prediction 696 736 - -
Lele05g0431 1723 MobiDBLite consensus disorder prediction 790 804 - -
Lele05g0431 1723 MobiDBLite consensus disorder prediction 1003 1017 - -
Lele05g0431 1723 MobiDBLite consensus disorder prediction 323 351 - -
Lele05g0431 1723 MobiDBLite consensus disorder prediction 583 613 - -
Lele05g0431 1723 Pfam BAH domain 147 254 IPR001025 GO:0003682
Lele05g0431 1723 MobiDBLite consensus disorder prediction 928 943 - -
Lele05g0431 1723 MobiDBLite consensus disorder prediction 544 558 - -
Lele05g0431 1723 MobiDBLite consensus disorder prediction 628 664 - -
Lele05g0431 1723 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 406 542 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0431 Lele-ChrLele05 2446918 2454818 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lele05g0431 BAH 1.3e-10 No_clan