Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0413 ATGGCTAACGTCCCTGCCAGTTCTTCACCTCCATGGAGCCCTAACCCTGATTTTGATTTTGACCCCTCAACCCTACTTCACCAAGTCTCCTCTCAGCCAAGTTCGCCTCAGTCTCATGCTCCGATGACCCCTAACCTGCTTCAACTCTCTTTCAACCAAGATCAAGTTTGCTTTGCCGCCGCCACTGACAACGGGTTTCGTATCTACAATTGCGAACCATTCCGGGAGCTCTTCCGCAGAGAGTTTGATGGAGGCGATGGCAGAACAGGGGGAATTGGTCATGTCGAAATGCTCTTTCGCTATAATATGCTGGCACTGGTTGGAGGTGGCACCAATCCTCAATACCCTCCTAGCAAGGTGATGATCTGGGATGATCATCAAGGCAGGTGCATTGGTGAGCTTTCGTTCCGATCAGCTGTTCGTGGTGTCCGGCTTCGACGAGACCGAATAATTGTAGTTGTGGAGCAGAAGATTTTTGTGTACAATTTCGCTGACTTTAAGTTACTTCATCAAATTGAGACCATTGCAAACCCGAAGGGACTCTGTGCAGTTTCGCAATTGGCTGATTCTATGATATTGGCGTGTCCCGGTTTGCATAAGGGTCAGATACGAGTTGAGCATTATGCCCAGAAAAAAACCAAATTCATTTCGGCTCATGATTCAAGAATAGCTTGTTTTGCTCTTACACTTGAGGGGCAGTTACTCGCCACCGCCAGTACCAAGGGTACTTTAATTCGAATTTTTGATACAGCCGATGGCACGCAGCTTCAAGAAGTAAGAAGGGGTGCAAATGTGGCAGAGGTCTATAGTTTGGCATTCTCTTCTACTGCTCAGTGGCTAGCAGTCTCGAGTGATAAGGGCACTGTCCATGTCTTCAGCCTTAAGGCTAACTCTAGTTCTCCTCAGCATGAAAAATCACAGACTACAACCGATTCTCATGCTGCCAGTACACCGTCTAGCTCACCCCTTGCATTAGTTAAATTTAGAGGAGTGTTACCCAAGTACTTTAATTCAGAGCGGTCACTTGCTCAGTTTCGCTTAGATGAGGGCACTTGTTACACTGTCGCATTCGGTCAGCTAGAGAATACAGTCATAATTCTTGGCATGGATGGGAGCTTCTACCGGTGTCAGTTTGATCCAGTACATGGCGGGGAGATGAATAAACTGGAATATCAGAACTTCTTAAAGCCAGAGACAGCCCCTTGGATACCTCAGTTTAATACATGGAGGTAATCTAGAGCTATAACAGCGTATCTGGATGAGAAATACAAAGAAACAGGAGCTGATCTGATATGGAAGAATGACCTAAAAGAAGCAGAGTTGGTTAGGATGTGGGCAGAGGTAGAGTCCCAATCCTATGACCCAGCAATCTCACCAATCATATTCGAATATTTAGTGTCTCCTTTCCAAGACAAAGAACCCAACCAATCAGTGATCGACGGCAGCTTGGAGAAGCTGAAGAATGTGCTCGACGTGTACGAGGAGAAGCTGAGCAACACCAAGTACCTTGCTGGGGATTTCTTCAGCCTCGCAGATCTAAACCACATAACCAACACTTACTATTTCACGAAGACGCATTGTGCTTATATGATCAATGATCACCCACATGTGAAGGCCTGGTGGGAAGATATCTCTTCCAGGCCTTCTTTATTGTTTGACTTTTGGTCAGAGTTGAGAGAACCATTAACTGAATTTGAAAGGCCTTCCATTATATTTGATCCAGATCCTGTTAAATGTTTGAAGCTTTATGCCAAACCAGTTGAAGATTCTCATCCTCCTGCAGAAACCTTGAAATACCAGACGTGGGTATTGAAAGTCTTTATCCACTGCGAAGGCTGCAAGAAGAAGGTCAAGAAAGTTCTTCAGGGAATCGATGGGGTTTATACAACGGAAATTGACTCTCAGCAGCACAAGGTGAGAGTAACAGGGGACGTGGAGGCTGAGACTCTCGTGAAGAAGCTCCTGAGATCAGGCAAGCTAGCAGAGCTTTTGCCTCAAGAAAAAGTCGACAAGAAAGACAAAGACAACAAGGCTGCAAAATCCAAAGGTGGTGGTAAAGAGAAAGAGAAAGAGCCATCAGACAAGAAAAATATTGAACCTTCTGTTAAGGAAGATGACCAAAAAGGTCCAGGGAATGACAACAATGACGAAGGTGAGGAGGCTGGCGGCCAAAAGAAGAAGAATAATAAGAAGAAGAACAAAGGGCAGAATGGTTCTGTTCCTCCTAATAATAATCCTAATGAAGAAGGAGCTGGCCAAGGAAGCACAAAAACTGAAGCATTACCGGTCTCTGCTTCACCTGTAACGGCCATGGCTTCCATGAACCCTAGACCCCCACTTCAGCAACCCTACCCATACCCACCTCCACAACAGTACTATTCACCGCCACAACCACCTCAACCTCAACCATATCACTATGGGTTAAGCTATAGCACGGCGTATCCCATCTCCAGTTCTTCCTATTATGCCCCTAATTTCATGCATTCGCATCATAACAATAATCCCTACTCTCGCCTGCCGCCGCCTCCACCTCCACCGTCGGATCCCTTCAGCCACCGTCATGTCGACCATGATGAGTATGAAGCCGTATGCTCCATCATGTAG 2604 0.4612 MANVPASSSPPWSPNPDFDFDPSTLLHQVSSQPSSPQSHAPMTPNLLQLSFNQDQVCFAAATDNGFRIYNCEPFRELFRREFDGGDGRTGGIGHVEMLFRYNMLALVGGGTNPQYPPSKVMIWDDHQGRCIGELSFRSAVRGVRLRRDRIIVVVEQKIFVYNFADFKLLHQIETIANPKGLCAVSQLADSMILACPGLHKGQIRVEHYAQKKTKFISAHDSRIACFALTLEGQLLATASTKGTLIRIFDTADGTQLQEVRRGANVAEVYSLAFSSTAQWLAVSSDKGTVHVFSLKANSSSPQHEKSQTTTDSHAASTPSSSPLALVKFRGVLPKYFNSERSLAQFRLDEGTCYTVAFGQLENTVIILGMDGSFYRCQFDPVHGGEMNKLEYQNFLKPETAPWIPQFNTWRXSRAITAYLDEKYKETGADLIWKNDLKEAELVRMWAEVESQSYDPAISPIIFEYLVSPFQDKEPNQSVIDGSLEKLKNVLDVYEEKLSNTKYLAGDFFSLADLNHITNTYYFTKTHCAYMINDHPHVKAWWEDISSRPSLLFDFWSELREPLTEFERPSIIFDPDPVKCLKLYAKPVEDSHPPAETLKYQTWVLKVFIHCEGCKKKVKKVLQGIDGVYTTEIDSQQHKVRVTGDVEAETLVKKLLRSGKLAELLPQEKVDKKDKDNKAAKSKGGGKEKEKEPSDKKNIEPSVKEDDQKGPGNDNNDEGEEAGGQKKKNNKKKNKGQNGSVPPNNNPNEEGAGQGSTKTEALPVSASPVTAMASMNPRPPLQQPYPYPPPQQYYSPPQPPQPQPYHYGLSYSTAYPISSSSYYAPNFMHSHHNNNPYSRLPPPPPPPSDPFSHRHVDHDEYEAVCSIM 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0413 867 MobiDBLite consensus disorder prediction 1 45 - -
Lele05g0413 867 FunFam Glutathione S-transferase F2 433 551 - -
Lele05g0413 867 MobiDBLite consensus disorder prediction 804 835 - -
Lele05g0413 867 MobiDBLite consensus disorder prediction 24 45 - -
Lele05g0413 867 MobiDBLite consensus disorder prediction 734 771 - -
Lele05g0413 867 MobiDBLite consensus disorder prediction 778 803 - -
Lele05g0413 867 MobiDBLite consensus disorder prediction 299 318 - -
Lele05g0413 867 ProSiteProfiles Heavy-metal-associated domain profile. 608 663 IPR006121 GO:0046872
Lele05g0413 867 Pfam Glutathione S-transferase, C-terminal domain 455 548 IPR004046 -
Lele05g0413 867 Gene3D - 18 375 IPR015943 GO:0005515
Lele05g0413 867 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 435 565 IPR010987 -
Lele05g0413 867 SUPERFAMILY HMA, heavy metal-associated domain 599 662 IPR036163 GO:0046872
Lele05g0413 867 SUPERFAMILY WD40 repeat-like 44 298 IPR036322 GO:0005515
Lele05g0413 867 Coils Coil 483 503 - -
Lele05g0413 867 MobiDBLite consensus disorder prediction 666 857 - -
Lele05g0413 867 Gene3D - 433 551 - -
Lele05g0413 867 Pfam WD domain, G-beta repeat 262 292 IPR001680 GO:0005515
Lele05g0413 867 SMART WD40_4 252 293 IPR001680 GO:0005515
Lele05g0413 867 SMART WD40_4 209 249 IPR001680 GO:0005515
Lele05g0413 867 SMART WD40_4 32 70 IPR001680 GO:0005515
Lele05g0413 867 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 42 394 - -
Lele05g0413 867 CDD GST_C_Phi 437 549 IPR034347 -
Lele05g0413 867 SUPERFAMILY GST C-terminal domain-like 418 549 IPR036282 -
Lele05g0413 867 FunFam Autophagy-related protein 18a isoform A 44 380 - -
Lele05g0413 867 CDD HMA 608 662 IPR006121 GO:0046872
Lele05g0413 867 MobiDBLite consensus disorder prediction 666 726 - -
Lele05g0413 867 Gene3D - 596 671 - -
Lele05g0413 867 Pfam Heavy-metal-associated domain 604 655 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0413 Lele-ChrLele05 2353622 2364403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0413 408 551 Glutathione S-transferase Gene Family AT3G62760 52.778 3.06e-47 166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0413 05 2353622 2364403 Lele05g0413 05 2353622 2364403 ECH
Lele05g0413 05 2353622 2364403 Lele06g0231 06 1400092 1406809 ECH
Lele05g0413 05 2353622 2364403 Lele07g0432 07 2441826 2448093 hybridization
Lele05g0413 05 2353622 2364403 Lele08g0236 08 1420013 1424164 hybridization