Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0405 ATGGTTGAAACCAGGCGCAGCTCCTCTTCTGCCAAGCGCTCTCTCTCTTCACCCCCTCCTTCTAAAGCTAAACGATCTAAGGTGTCAGAGGATGCGTCGTCAACCAGTCTCCCATCGGCTGAAATTTTCGGTCAGGTCAACGAATCTGGTAATGAATCTCGAGAGCCGGAGCTACGGCCATCTGATCTGCCAGATGCCGATTCGTTGAAAGCTGTAGACCTGAGTGACGCGAGGTTACCTGAGAAATCCCCTGCCGTGGCTGTCGAAGGCGAGGCTCTGGTGTCACCGAGGTCTTCAGATGAAACTGCGGTGGAAGCGGAGAAATCAAAGTCTGCTGGTGTGGCGGCGCACGGGCGGTCGAAGAAACGCCCAGTTAAATCCACAAAATCGAGTGACAAGGCTGCATGGGGGAAGCTTCTCTCTCAGTGCTCTCAGAATCCTCATCTGTCCATGTACGGGCTCTTTTCTGTTGGTCAAGGACGTCAGTGTGATTTATGTCTTAAAGATCCTGTTGTTAGTAATGTTTTGTGCAAGTTGAGGCACATAGAGCGTGGAGGTTCATCTGTTGCATTACTGGAAGTTATAGGAGGTAAAGGTGTTGTCCAAGTCAATGGCAGGAACTACCTTAAAAATTCCCGTGTGATCTTAAGTGGTGGTGATGAGGTGGTCTTCAGTTCTTCTGGCAAGCATGCTTATATTTTTCAACAGCTCACCAATAATAATATAACTACAACAGGGTTACCCCCTTCTGTAAATATATTAGAAGCCCGAAGTGCACAAATTAAGGGAATTCGAATCGAAGGATCTGGGGACTCTTCAGCTGTTGCAGGAGCATCAATATTAGCATCTTTATCTAACCTTCATAAAGATTTATCTCTCCTTCCACCTCCTGCTAAAACCAGGGAGAATGCCACCCATAATGCTGAGGTTTTGTCTGTAACTTCTGGCCATAGGGATGATAGTATGGACAATGAAATGAAGGATGCCACCAAAACTGATGATTCAACCGAAAATATTTTATCTGAGAAAACTGTTCTTGCATCCTCTGCTGCTGCCAATGAAAGTCCTAGTCTTGACAGCACCGGAGTAGATGCTGGTGTGGATGCAGATGTTGGGAAGGTAAATGGGGCTGCCTATGAATTAAGGCCATTGTTGCGCATGCTTGCTGGTTCTAGTACTGAATTTGATTTGGGCAGTAGCATTTCCAAAATATTGGAAGAGCGGAGGGATTTAAGAGAAATCCTTAAGGATTTTGACCCCCCAACAATCTTGGCATCAACAAGGCGGCAAGCATTTAAGGAGAGTTTACAACAAGGAATTCTAAATCCTGATAATATTGATGTCTCATTTGAAAGTTTCCCATACTTTCTAAGCGATACAACAAAGAATGTTCTGATTGCTTCTACATACATTCATTTGAAGTGCAATGGTTTTGCAAAGTATGCTTCAGATCTACCTTCAGTGTGCCCAAGAATATTGTTATCTGGTCCTGCAGGTTCGGAGATATATCAGGAAACTTTGTCAAAGGCCCTTGCAAAGAATTTTGGTGCCAGGCTACTGATTGTGGATTCTCTTTCATTGCCTGGTGGGATGCCACCAAAGGAGTCTGATTCTGCTAAAGAAAGTTCTAGGCTTGAGAAAGCATCTTGGTTTAGTAAGCGAAGTGCACTGGCTACCACATTACAGCATAAGAAGCCAACTTCTAGTGTCGATGCTGAGATTGTAGGAGGATCAACATTAAGCTCTCAGGCCATGCTGAAGCAAGAGGTATCTACTGCGTCATCTAAGGGCTCTACCATAAAAACAGGTGACAGAGTTAAATTCGTTGGTAATTTTCCTTCGACCAGCATATCGCTGACAAATTATCCTTCTAGGGGACCAAGCTATGGCTCCCGTGGAAAAGTTCTTCTTGCTTTTGAAGAAAATGGGTCATCAAAAATTGGAGTCAGGTTTGATAAGTCAATTCCAGATGGCAACGATCTTGGAGGCCTTTGTGAAGAGGATCGCGGTTTCTTTTGTTCTGCTAATCATTTACTACGAGTTGATGGTTCTGGGGTGGATGACAATGACAAGCTTGCAATAAAAGAGATCTTTGAGGTTGCCTCCAATCAAAGCAGAAGTGGTTCACTAGTGTTGTTCATGAAAGATGTAGAGAAAGCAATGGTTGGAAACACTGAAGTTTTGAAGAGTAAATTGGAAAGTTTGCACCAGAATGTTGTTGTAATTGGCTCGCATACCCAGCCAGACAATCGCAAGGAGAAGACCCACCCAGGTGGCCTTCTGTTCACAAAGTTTGGGAGCAATCAGACTGCTCTACTTGACCTTGCATTTCCGGATAATTTCAGTAGACTTCATGATAGGAGCAAAGAAACCCCCAAAACAATGAAGCAACTTAGCCGCCTTTTCCCCAACAAAGTGACAATACAGCTGCCTCAGGATGAGGCTTTGCTCTCTGATTGGAAACAACAGTTAGAACGTGATGTTGAAACTATGAAAGCTCATTCAAATGTTGTCAGCATTCGAACAGTTCTCAGCAGGTTTGGATTGGATTGCCCTGACCTTGAGACTCTTTGTATCAAAGATCAAGCCCTAACAACTGAAAGTGTGGAAAAAGTCATTGGCTGGGCCGTAAGTCATCATTTTATGTATCAATCTGAGGATTCAATCAAAGACTCTAAGCTTGTGATATCTACTGAGAGCATTAAGTATGGGTTGAACATTCTACAGGGCATTCTAAGTGAAAACAAGAACTTAAAGAAATCACTCAAGGACGTGGTTACTGAGAATGAATTTGAGAAAAAACTTCTTGCCGATGTTATTCCGCCCAGTGATATTGGGGTCACTTTTGATGATATTGGAGCCTTAGAAAATGTAAAGGACACCTTGAAGGAATTGGTCATGCTTCCTCTTCAGAGGCCTGAATTGTTCTGCAAGGGACAGTTGACCAAGCCTTGCAAGGGGATATTGCTCTTTGGCCCCCCTGGTACCGGGAAAACAATGCTTGCAAAAGCTGTAGCAACCGAGGCTGGAGCAAATTTCATCAACATCTCGATGTCGAGTATCACTTCAAAGTGGTTTGGTGAAGGAGAGAAATACGTCAAAGCAGTCTTTTCTCTAGCAAGCAAAATTGCTCCTAGTGTTATTTTTGTTGATGAGGTTGATAGCATGTTAGGAAGACGTGAGAACCCTGGTGAGCATGAGGCTATGCGTAAGATGAAGAATGAGTTTATGGTGAACTGGGATGGTTTACGTACAAAAGATAAAGAGCGTATACTTGTTCTTGCTGCGACAAATAGACCTTTTGACCTTGATGAGGCTGTTATTAGGAGGCTTCCCCGAAGATTGATGGTTAATTTGCCAGATGCTCTAAACAGAGAGAAGATTCTGAGAGTCATCTTAGCAAAAGAAGACTTGGCTCCTGATGTTGAGTTGGAAGCAATTGCAAATATGACTGATGGATATTCAGGAAGTGACTTAAAGAATCTGTGTGTTACAGCAGCTCACTGTCCAATTAGAGAAATCTTGGAGAAGGAAAAGAAGGAGAGGAGTCTGGCGTTGTCTGAGAACAAACCTTTACCTGCATTACGTAGCAGTGCCGACATTCGGCCTTTAAAGATGGAAGATTTCAAATATGCACATGAGCAAGTGTGTGCAAGCGTGTCATCGGAGTCAACAAATATGAATGAGCTACTCCAATGGAATGACCTTTATGGAGAAGGCGGGTCCAGAAAGATGAGATCTCTGAGCTATTTCATGTAA 3759 0.4355 MVETRRSSSSAKRSLSSPPPSKAKRSKVSEDASSTSLPSAEIFGQVNESGNESREPELRPSDLPDADSLKAVDLSDARLPEKSPAVAVEGEALVSPRSSDETAVEAEKSKSAGVAAHGRSKKRPVKSTKSSDKAAWGKLLSQCSQNPHLSMYGLFSVGQGRQCDLCLKDPVVSNVLCKLRHIERGGSSVALLEVIGGKGVVQVNGRNYLKNSRVILSGGDEVVFSSSGKHAYIFQQLTNNNITTTGLPPSVNILEARSAQIKGIRIEGSGDSSAVAGASILASLSNLHKDLSLLPPPAKTRENATHNAEVLSVTSGHRDDSMDNEMKDATKTDDSTENILSEKTVLASSAAANESPSLDSTGVDAGVDADVGKVNGAAYELRPLLRMLAGSSTEFDLGSSISKILEERRDLREILKDFDPPTILASTRRQAFKESLQQGILNPDNIDVSFESFPYFLSDTTKNVLIASTYIHLKCNGFAKYASDLPSVCPRILLSGPAGSEIYQETLSKALAKNFGARLLIVDSLSLPGGMPPKESDSAKESSRLEKASWFSKRSALATTLQHKKPTSSVDAEIVGGSTLSSQAMLKQEVSTASSKGSTIKTGDRVKFVGNFPSTSISLTNYPSRGPSYGSRGKVLLAFEENGSSKIGVRFDKSIPDGNDLGGLCEEDRGFFCSANHLLRVDGSGVDDNDKLAIKEIFEVASNQSRSGSLVLFMKDVEKAMVGNTEVLKSKLESLHQNVVVIGSHTQPDNRKEKTHPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKTMKQLSRLFPNKVTIQLPQDEALLSDWKQQLERDVETMKAHSNVVSIRTVLSRFGLDCPDLETLCIKDQALTTESVEKVIGWAVSHHFMYQSEDSIKDSKLVISTESIKYGLNILQGILSENKNLKKSLKDVVTENEFEKKLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDALNREKILRVILAKEDLAPDVELEAIANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKERSLALSENKPLPALRSSADIRPLKMEDFKYAHEQVCASVSSESTNMNELLQWNDLYGEGGSRKMRSLSYFM 1252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0405 1252 Gene3D - 1120 1214 - -
Lele05g0405 1252 MobiDBLite consensus disorder prediction 1 131 - -
Lele05g0405 1252 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 946 1122 - -
Lele05g0405 1252 Gene3D - 946 1226 IPR027417 -
Lele05g0405 1252 ProSitePatterns AAA-protein family signature. 1091 1110 IPR003960 GO:0005524|GO:0016887
Lele05g0405 1252 MobiDBLite consensus disorder prediction 1 23 - -
Lele05g0405 1252 Pfam AAA+ lid domain 1141 1177 IPR041569 -
Lele05g0405 1252 Gene3D - 120 243 - -
Lele05g0405 1252 CDD AAA 986 1119 - -
Lele05g0405 1252 SUPERFAMILY SMAD/FHA domain 152 228 IPR008984 GO:0005515
Lele05g0405 1252 MobiDBLite consensus disorder prediction 294 337 - -
Lele05g0405 1252 MobiDBLite consensus disorder prediction 30 51 - -
Lele05g0405 1252 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 947 1226 IPR027417 -
Lele05g0405 1252 SMART AAA_5 984 1121 IPR003593 -
Lele05g0405 1252 MobiDBLite consensus disorder prediction 52 77 - -
Lele05g0405 1252 MobiDBLite consensus disorder prediction 316 337 - -
Lele05g0405 1252 CDD FHA 160 235 IPR000253 GO:0005515
Lele05g0405 1252 Pfam ATPase family associated with various cellular activities (AAA) 988 1117 IPR003959 GO:0005524|GO:0016887
Lele05g0405 1252 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 430 1251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0405 Lele-ChrLele05 2297801 2306999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0405 983 1188 Calmodulin-binding Proteins AT3G56690 36.190 4.67e-32 134