Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0390 ATGCTAGGAGTTTCCAGTATACTTGGGCATGAGAAATGTGAAAGCTACTTAGTTTTCAGTGGTGAAACTGCACTTGCAGACTCCTTACGAGCATTTTTATATTTTCTTGGTCTTGCTTATTGTTTCATTGGGTTATCAGCTATAACGGCTCGGTTCTTCCGCTCTATGGAAAATATTGTTAAGCACAAAAGGGAGGTAGTGGAAATAGATCCCGTTACTCATGCTGAAGTTATTAGACGCCACAAAGTATGGAATTACACAATTGCAGATATTAGCTTGCTGGCTTTTGGAACTAGCTTTCCTCAGATATCATTGGCCACCATTGATGCTATACAAAACATAGGAAACCTGTACGCTGGAGGTCTGGGTCCTGGAACTCTTGTGGGTTCTGCTGCTTTCGACCTTTTCCCTATCCATGCCGTTTGTGTAGTAGTTCCAAAAGCTGGAGAGCTAAAAAAGATTGCGGATTTAGGAGTATGGCTTGTGGAGTTATTTTGGTCCTTTTGGGCTTACATTTGGTTATACATAATTTTGGAGGTATGGACGCCAAATGTGGTGACTTTGTGGGAGGCTTTGTTGACAGTAATGCAGTATGGATTGCTGTTGATTCATGCTTATGCTCAAGACAAACGTTGGCCTTATATTTCTTTACCTCTTGCAAGAAGTGAGAGGCCGGAGGATTGGGTGCCGGAAGAGACATATTCTTCCATACAAGAAAGTCATGACTATGAGGAGTTCTCTGAGATAATTTATGACGATGAAGAAAATAAGGATGTTGTTGACATATTTTCCATTCATTCAAAAAATGAGACTGGTTCTTTGTATCGAAGAGTATATCCAACAGATAATGCTGCCGAAACTATTGACGATGCTACAGAAACAATGTTCGATTATATTCATTTTCTTAGACTTTGGAAACAGCAATTTGTGGATGCAGTTATGTTGGAAAGTAAAAATTCAAAAAGGCTGGACAACATCTTTCTCCGTGCAGCAAGAATTTTCTGGGAATTGCTCCTTTTACCATGGAGACTTCTGTTTGCTATTGTTCCTCCGTGTCATATAGCTCATGGTTGGATTTCTTTCATCTGCTCTCTACTCTTCATCAGTGGGATAGCTTACATCGTGACTAAGCTTACGGATATGATAAGTTGTGTTACAGGAATAAATCCGTATGTCATAGCATTTACAGCATTAGCCAGTGGAACCTCGTGGCCTGATTTAGTAGCAAGCAAGATAGCTGCTGAACGCCAAACAACTGCGGACTCTGCCATTGCAAACATCACTTGCAGTAATTCAGTGAATATATACGTGGGCATTGGGGTTCCATGGCTGATTGACACAGCGTATAACTATGTAGCGTATAGACAACCTCTGCGGATTCAGAATGCCTCTGGCCTAAGCTTTTCATTGCTTGTTTTCTTCGTTACCTCATTCGGGTGTATCACGGTTTTGGTTATTAGGCGTCTACTTTTTGGTGCAGAGCTAGGAGGCCCAAGGCTCTGGGCTTGGATCACCTGTGTATACTTCATGTTTCTTTGGATCATTTTTGCTGTTCTATCTTCGCTCGGGGTTTCTGGGGTCATATAG 1587 0.4146 MLGVSSILGHEKCESYLVFSGETALADSLRAFLYFLGLAYCFIGLSAITARFFRSMENIVKHKREVVEIDPVTHAEVIRRHKVWNYTIADISLLAFGTSFPQISLATIDAIQNIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKIADLGVWLVELFWSFWAYIWLYIILEVWTPNVVTLWEALLTVMQYGLLLIHAYAQDKRWPYISLPLARSERPEDWVPEETYSSIQESHDYEEFSEIIYDDEENKDVVDIFSIHSKNETGSLYRRVYPTDNAAETIDDATETMFDYIHFLRLWKQQFVDAVMLESKNSKRLDNIFLRAARIFWELLLLPWRLLFAIVPPCHIAHGWISFICSLLFISGIAYIVTKLTDMISCVTGINPYVIAFTALASGTSWPDLVASKIAAERQTTADSAIANITCSNSVNIYVGIGVPWLIDTAYNYVAYRQPLRIQNASGLSFSLLVFFVTSFGCITVLVIRRLLFGAELGGPRLWAWITCVYFMFLWIIFAVLSSLGVSGVI 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0390 528 Pfam Sodium/calcium exchanger protein 357 520 IPR004837 GO:0016020|GO:0055085
Lele05g0390 528 Pfam Sodium/calcium exchanger protein 34 206 IPR004837 GO:0016020|GO:0055085
Lele05g0390 528 Gene3D - 314 522 IPR044880 -
Lele05g0390 528 Gene3D - 86 223 IPR044880 -
Lele05g0390 528 PANTHER SODIUM/CALCIUM EXCHANGER 12 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0390 Lele-ChrLele05 2228792 2231891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0390 5 528 Antiporters AT2G47600 72.316 0.0 787