Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0380 ATGGCTTTCAAGCTATGTACCCTCTCAACAATGGCGTTTCTTCTTCTCCTTCCCCTGTTCACCTCCTTAGCATGTGCAGACACCTCTCCTTCGACTCCGGTCACCACAGGAACTGCATGTAGTTCCACCCCTGACCCTTCTTATTGCAAGTCTGTTCTCCCTTCCCACCAGAAAGGCAATATCTACGACTATGGCCGTTTCTCCGTCAGCAAATCCTTATCACAGTCCCGTAAATTCATGAGCCTCGTTGATAAGTATCTCAGCCGACGATCTACTTTATCCGCCGCCGCCGTTCGTGCACTCGAAGATTGCCGGACGCTGGCCGATCTCAACTACGATTTCCTTTCGAATTCCTTACAAACTGTGAACAAGACGACTAGGTTTCTTCCCAGTTTACAAGCCGATGATATCCAAACCCTTCTCAGTGCCATCTTAACTAACCAACAAACCTGCCTTGATGGCCTGAAAGACACAGCTTCAGCTTGGAGCGTCAAGAACGGACTCTCCGTTCCACTTTCTAACGATACCAAGCTGTACAGTATGTCTCTGGCTCTGTTCACGAAAGGGTGGGTTCCGGATGAGAAGAAGGCAACGACTGCGTTTCAGCCAACCAAGAAACAACTTGCCTTCGGAAATGGGCGTTTGCCGCTTAAAATGTCGAGCAGGACTCTTGCCATCTACCAGTCCGTGAGTCGGAGAAAAATGCTTCAGACAGCCACCGTGGGAGGTGGCGTTGTTGTTGTTAAGGACATCGTGACGGTGAGACAAGACGGAACTGGAAACTTCACCACCATCAATGAGGCCATTGCTGCTGCTCCAAACAAGTCTTCCTCTGCCAGCGGTTACTTCCTCATCTATGTCAGCGCTGGTGTTTACGAAGAAAACGTCAGCATCGACAAGAAGAAGACGTACTTGATGATGGTCGGAGACGGTATCAACAAGACCATCATTACCGGCAACCGAAGCGTCGTTGATGGGTGGACCACCTTCAACTCCGCAACTTTTGCCGTGGTAGGAGAAGGATTCGTGGGAGTGAATATGACGATTCGTAACACGGCGGGGCCAGAGAAGCACCAGGCCGTTGCAGTTCGAAACGGAGCGGATCTATCGACGTTTTACAGTTGCAGCTTTGAGGGGTACCAGGACACGTTATATGCGCATTCTCTGAGACAGTTCTACAGAGAATGTGATATTTACGGCACCATAGATTTCATATTCGGCAACGCCGCCGTGGTACTCCAAAACTGCAATCTGTATCCTCGTTTACCCATGAGCGGGCAATTCAACGCCATCACGGCACAGGGACGGACCGACCCGAATCAAAACACGGGCATTTCGATCCATAACTGCAGCATCAGGGCAACCGACGATTTGGCGGCGGCCAATGGTTCGGTGAGCACGTATCTCGGCAGGCCGTGGAAGGAGTACTCGAGGACGGTTTATATGGAGAGCTTCATGGACAGTGTGATAGAGAGTGCGGGTTGGCAGAAATGGGACGGCGATTTTGCGTTAAGCACTCTGTATTATGCAGAGTTCAATAACGGTGGTCCCGGTTCGAGCACCGCCAACAGAGTGACGTGGCCTGGGTACCATACTATTAACGCCACCGACGCTGCTAATTTCACGGTGTCCAACTTCTTGCTCGGAGATGACTGGTTGCCTCACACTGGAGTCGCTTACACCAGCACCTTAATATAG 1698 0.5088 MAFKLCTLSTMAFLLLLPLFTSLACADTSPSTPVTTGTACSSTPDPSYCKSVLPSHQKGNIYDYGRFSVSKSLSQSRKFMSLVDKYLSRRSTLSAAAVRALEDCRTLADLNYDFLSNSLQTVNKTTRFLPSLQADDIQTLLSAILTNQQTCLDGLKDTASAWSVKNGLSVPLSNDTKLYSMSLALFTKGWVPDEKKATTAFQPTKKQLAFGNGRLPLKMSSRTLAIYQSVSRRKMLQTATVGGGVVVVKDIVTVRQDGTGNFTTINEAIAAAPNKSSSASGYFLIYVSAGVYEENVSIDKKKTYLMMVGDGINKTIITGNRSVVDGWTTFNSATFAVVGEGFVGVNMTIRNTAGPEKHQAVAVRNGADLSTFYSCSFEGYQDTLYAHSLRQFYRECDIYGTIDFIFGNAAVVLQNCNLYPRLPMSGQFNAITAQGRTDPNQNTGISIHNCSIRATDDLAAANGSVSTYLGRPWKEYSRTVYMESFMDSVIESAGWQKWDGDFALSTLYYAEFNNGGPGSSTANRVTWPGYHTINATDAANFTVSNFLLGDDWLPHTGVAYTSTLI 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0380 565 FunFam Pectinesterase 37 188 - -
Lele05g0380 565 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 187 IPR006501 GO:0004857
Lele05g0380 565 CDD PMEI-like_3 38 190 - -
Lele05g0380 565 Gene3D - 246 564 IPR012334 -
Lele05g0380 565 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Lele05g0380 565 Pfam Plant invertase/pectin methylesterase inhibitor 38 185 IPR006501 GO:0004857
Lele05g0380 565 PANTHER PECTINESTERASE 20 554 - -
Lele05g0380 565 SUPERFAMILY Pectin lyase-like 248 563 IPR011050 -
Lele05g0380 565 ProSitePatterns Pectinesterase signature 2. 398 407 IPR033131 -
Lele05g0380 565 FunFam Pectinesterase 245 564 - -
Lele05g0380 565 Pfam Pectinesterase 252 550 IPR000070 GO:0030599|GO:0042545
Lele05g0380 565 SMART PMEI_2 29 185 IPR006501 GO:0004857
Lele05g0380 565 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 188 IPR035513 -
Lele05g0380 565 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 188 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0380 Lele-ChrLele05 2178283 2180089 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0380 14 565 Carbohydrate Esterase AT4G02330 62.852 0.0 738