Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0379 ATGAATACTTATCAACCTCGTACTCCACTGCCAATCATTCTAGCTATGTTCTTCCCTACTCTCAAGCCGAAGATATTCACCAAGATCAGTGCCATTCTCAAAAACCGACAGTCTTGTTTGGAAGGCCTTCAGACAACGGCTTCAGATGCAAGAGTAAAGCACGATCTCTCCGTCCCAATCTTGAACGACTCCAACCTTCACAGCTTCTCTCTTGCTCTGTTCGTGAAGGGTTGGCTCCCTGAAAAGAAAATCAGACCATCATCTTGGCACAACGGTGGAAGAAATTTAGGGTTCCAGAACGGACGTTTGCCGGCGTTGGAGATGTCAATGCCAGCAATTGTGGTAGGACAAGGATTCGTAGCGGCGAACATAACATTCAGAAACACGGCAGGGCCAAGCAAAAGGCAAGCGGTGGCATTGAGAAGTGGGGCAGACATGTCTGTTTTCTACAGCTGCAGTTTCGAGGGGTACCAAGATACTCTGTATACGCATTCCATGAGGCAATTCTACAGAGAATGTGACATATATGGAACGGTCGACTTCATATTCGGGAACGCAGCTGTTGTACTAGAAAACTGCAACATATATCCACGCTTGCCCATGAGTGGACAGTTCACGCAATCACAGCACAGGAACGTTACTGTGAGGACTTACCTGGGGAGGCCATGGAAGCAGTACTCGAGGACGGTTTACATGCAGAGTTTCATGGATACCTTGATAAATGCTTCGGGTTGGCGGGAATGGACTGGAGATTTTGCTTTGAATACGATGTACTATGCAGAATATGACAACTGGGGACCCGGTTCGGATACTTTGAACAGAGTGACGTGGCCTGGTTACCATCTGATTAATGCAACGGATGATGCCGCCAATTTCCCGGCGGTTAACTTCCTGCAAGCCGATGCATGGGTGCCTCGCATCGGCGTGCCCTCTTCTCCGGTTTGA 945 0.4857 MNTYQPRTPLPIILAMFFPTLKPKIFTKISAILKNRQSCLEGLQTTASDARVKHDLSVPILNDSNLHSFSLALFVKGWLPEKKIRPSSWHNGGRNLGFQNGRLPALEMSMPAIVVGQGFVAANITFRNTAGPSKRQAVALRSGADMSVFYSCSFEGYQDTLYTHSMRQFYRECDIYGTVDFIFGNAAVVLENCNIYPRLPMSGQFTQSQHRNVTVRTYLGRPWKQYSRTVYMQSFMDTLINASGWREWTGDFALNTMYYAEYDNWGPGSDTLNRVTWPGYHLINATDDAANFPAVNFLQADAWVPRIGVPSSPV 314
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0379 314 SUPERFAMILY Pectin lyase-like 112 312 IPR011050 -
Lele05g0379 314 Pfam Pectinesterase 209 301 IPR000070 GO:0030599|GO:0042545
Lele05g0379 314 Pfam Pectinesterase 114 206 IPR000070 GO:0030599|GO:0042545
Lele05g0379 314 Gene3D - 99 313 IPR012334 -
Lele05g0379 314 ProSitePatterns Pectinesterase signature 2. 175 184 IPR033131 -
Lele05g0379 314 PANTHER PECTINESTERASE 112 305 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele05g0379 Lele-ChrLele05 2171191 2172630 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0379 113 310 Carbohydrate Esterase AT2G47550 61.778 1.45e-95 291