Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0378 ATGATTGAACTTGTCACACATTCTATCGTTGATCGAAACCTCAAGGCACCACTTTCACTTTACTATTATCAGCTCTCTTCCTTTCCCCATCTTACCTCCAAATCTGTCCCACAATTCATCTCCTCCCTGCTCAATCTCACGGTGTCCGAGGTGAAATCATGGTCCCACAACTGCAATGGCCTCCGAAGCAACCTTAGGAATATCAGCCCACTTGAACAGAGAGCCCTCGACGACTGTCTCAAACTGTTTGATGACACCGTCTACGAGCTCGACGTCACTATGGCGGATCTCACGGGCGCCAAAATAGGCTTCGAGCGTTACAGTGACTTACAGACACTGCTCCGCGGGGCAATGACTAACCTGCACACGTGTCTCGACGGGTTTGCTTATACCCGAGGGAATGTGAGAGACAGGATACAGGACAGAGAACGAAACCTCCTGGAAGCTAATGTGAACGAAACGAGGTTCGATCTTATGGTGGCAAAAGAAGGCACGGGCAATTCCACTACTATTGGGGAAGCTGTGAATGCAGCTCCGAACTCCAGAACGAGCAGGCAAGCGCGTTGTTATATATCTATTATTATATGGTATTTTGTGTTTGAGGGAATGATTGTTAATGAAGGCGTTTGA 630 0.4794 MIELVTHSIVDRNLKAPLSLYYYQLSSFPHLTSKSVPQFISSLLNLTVSEVKSWSHNCNGLRSNLRNISPLEQRALDDCLKLFDDTVYELDVTMADLTGAKIGFERYSDLQTLLRGAMTNLHTCLDGFAYTRGNVRDRIQDRERNLLEANVNETRFDLMVAKEGTGNSTTIGEAVNAAPNSRTSRQARCYISIIIWYFVFEGMIVNEGV 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0378 209 TIGRFAM PME_inhib: pectinesterase inhibitor domain 25 148 IPR006501 GO:0004857
Lele05g0378 209 SMART PMEI_2 5 171 IPR006501 GO:0004857
Lele05g0378 209 PANTHER PECTINESTERASE 33 192 - -
Lele05g0378 209 Gene3D Invertase/pectin methylesterase inhibitor family protein 18 152 IPR035513 -
Lele05g0378 209 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 148 IPR035513 -
Lele05g0378 209 Pfam Plant invertase/pectin methylesterase inhibitor 25 144 IPR006501 GO:0004857
Lele05g0378 209 CDD PMEI-like_3 25 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0378 Lele-ChrLele05 2168748 2169895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0378 32 185 Carbohydrate Esterase AT4G02320 31.068 6.17e-21 88.2